GPC1 6954

Name: GPC1	Sequence: fasta or formatted (558aa)		NCBI GI: 167001141
Description: glypican 1 precursor		Referenced in: Protein Glycosylation
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.9 55 4 C cysteine 3.4 19 2 D aspartate 5.9 33 2 E glutamate 6.1 34 2 F phenylalanine 2.9 16 1 G glycine 7.2 40 1 H histidine 1.6 9 1 I isoleucine 2.3 13 1 K lysine 3.6 20 1 L leucine 12.5 70 3 M methionine 2.0 11 1 N asparagine 3.4 19 2 P proline 5.6 31 2 Q glutamine 4.8 27 2 R arginine 8.4 47 3 S serine 7.2 40 4 T threonine 4.5 25 1 V valine 5.2 29 2 W tryptophan 1.6 9 2 Y tyrosine 2.0 11 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 glypican 1 precursor GPC6 0.442 glypican 6 precursor GPC4 0.402 glypican 4 GPC2 0.325 glypican 2 GPC5 0.143 glypican 5 GPC3 0.129 glypican 3 PLEC1 0.008 plectin 1 isoform 11 PLEC1 0.008 plectin 1 isoform 10 PLEC1 0.008 plectin 1 isoform 8 PLEC1 0.008 plectin 1 isoform 7 PLEC1 0.008 plectin 1 isoform 6 PLEC1 0.008 plectin 1 isoform 3 PLEC1 0.008 plectin 1 isoform 2 PLEC1 0.008 plectin 1 isoform 1 LOC100133142 0.007 PREDICTED: similar to zinc finger protein 208 [Homo... LOC100133142 0.007 PREDICTED: similar to zinc finger protein 208 [Homo... LOC100130097 0.006 PREDICTED: similar to Kinesin-Like Protein family m... LOC100130097 0.006 PREDICTED: hypothetical protein PRSS33 0.006 protease, serine, 33 LOC100130097 0.005 PREDICTED: hypothetical protein GRN 0.005 granulin precursor LOC100293773 0.005 PREDICTED: hypothetical protein LOC100287376 0.005 PREDICTED: hypothetical protein LOC100287376 0.005 PREDICTED: hypothetical protein XP_002343731 MAPT 0.005 microtubule-associated protein tau isoform 6 MAPT 0.005 microtubule-associated protein tau isoform 1 AMAC1L1 0.005 PREDICTED: acyl-malonyl condensing enzyme 1-like 1 ... FBXO30 0.005 F-box only protein 30 ANKRD6 0.005 ankyrin repeat domain 6 GFRA4 0.005 GDNF family receptor alpha 4 isoform a precursor [Ho... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.