GPC4 13464

Name: GPC4	Sequence: fasta or formatted (556aa)		NCBI GI: 21614525
Description: glypican 4		Referenced in: Protein Glycosylation
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.7 43 2 C cysteine 3.4 19 2 D aspartate 5.8 32 2 E glutamate 6.5 36 2 F phenylalanine 5.2 29 2 G glycine 5.8 32 1 H histidine 1.8 10 2 I isoleucine 2.9 16 1 K lysine 6.7 37 2 L leucine 9.2 51 2 M methionine 3.2 18 1 N asparagine 6.1 34 2 P proline 3.8 21 2 Q glutamine 4.3 24 2 R arginine 4.9 27 2 S serine 7.9 44 2 T threonine 3.4 19 2 V valine 7.4 41 2 W tryptophan 0.9 5 1 Y tyrosine 3.2 18 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 glypican 4 GPC6 0.630 glypican 6 precursor GPC1 0.403 glypican 1 precursor GPC2 0.339 glypican 2 GPC5 0.159 glypican 5 GPC3 0.130 glypican 3 TPM3 0.009 tropomyosin 3 isoform 2 EXOC3 0.007 Sec6 protein M6PRBP1 0.006 mannose 6 phosphate receptor binding protein 1 [Homo... GOLGB1 0.006 golgi autoantigen, golgin subfamily b, macrogolgin ... FAM123B 0.005 family with sequence similarity 123B KIAA0748 0.005 hypothetical protein LOC9840 KIAA0748 0.005 hypothetical protein LOC9840 SMARCA4 0.004 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.004 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.004 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.004 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.004 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.004 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.004 SWI/SNF-related matrix-associated actin-dependent re... SYNE1 0.004 spectrin repeat containing, nuclear envelope 1 isofo... SYNE1 0.004 spectrin repeat containing, nuclear envelope 1 isof... LTBP4 0.004 latent transforming growth factor beta binding prot... LTBP4 0.004 latent transforming growth factor beta binding prot... LTBP4 0.004 latent transforming growth factor beta binding prot... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.