GPC3 30698

Name: GPC3	Sequence: fasta or formatted (580aa)		NCBI GI: 4758462
Description: glypican 3		Referenced in: Protein Glycosylation
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.2 30 2 C cysteine 3.1 18 2 D aspartate 5.5 32 2 E glutamate 5.9 34 2 F phenylalanine 4.8 28 3 G glycine 6.0 35 2 H histidine 2.2 13 1 I isoleucine 4.8 28 2 K lysine 5.9 34 2 L leucine 11.0 64 2 M methionine 4.0 23 2 N asparagine 5.0 29 2 P proline 5.0 29 6 Q glutamine 5.5 32 2 R arginine 4.1 24 3 S serine 6.4 37 2 T threonine 4.3 25 3 V valine 7.1 41 2 W tryptophan 0.7 4 1 Y tyrosine 3.4 20 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 glypican 3 GPC5 0.360 glypican 5 GPC6 0.136 glypican 6 precursor GPC4 0.124 glypican 4 GPC1 0.124 glypican 1 precursor GPC2 0.086 glypican 2 SYNPO 0.009 synaptopodin isoform A FAM71F1 0.007 testes development-related NYD-SP18 LOC653061 0.007 PREDICTED: similar to Golgin subfamily A member 8-l... ZFHX2 0.006 PREDICTED: zinc finger homeobox 2 ZFHX2 0.006 PREDICTED: zinc finger homeobox 2 ZFHX2 0.006 PREDICTED: zinc finger homeobox 2 LOC441454 0.006 PREDICTED: hypothetical protein SCN11A 0.006 sodium channel, voltage-gated, type XI, alpha [Homo... DNAH17 0.006 PREDICTED: dynein, axonemal, heavy chain 17 DNAH17 0.006 PREDICTED: dynein, axonemal, heavy chain 17 DNAH17 0.006 PREDICTED: dynein, axonemal, heavy chain 17 LOC653061 0.006 PREDICTED: similar to Golgin subfamily A member 8-l... LOC653061 0.006 PREDICTED: similar to Golgin subfamily A member 8-l... LOC728080 0.005 PREDICTED: similar to Golgin subfamily A member 8-l... LOC390561 0.005 PREDICTED: similar to hect domain and RLD 2 LOC727909 0.005 PREDICTED: similar to Golgin subfamily A member 8-l... LOC100132317 0.005 PREDICTED: similar to Putative uncharacterized prot... LOC100286914 0.005 PREDICTED: hypothetical protein XP_002342632 LOC100288102 0.005 PREDICTED: hypothetical protein XP_002342211 LOC100287654 0.005 PREDICTED: hypothetical protein XP_002342052 LOC100288646 0.005 PREDICTED: hypothetical protein XP_002344292 PINX1 0.004 PIN2-interacting protein 1 DST 0.004 dystonin isoform 1eB precursor CENPE 0.004 centromere protein E Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.