GPC6 31449

Name: GPC6	Sequence: fasta or formatted (555aa)		NCBI GI: 5031719
Description: glypican 6 precursor		Referenced in: Gene Structure Protein Glycosylation
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.7 37 2 C cysteine 3.2 18 2 D aspartate 5.4 30 2 E glutamate 7.7 43 3 F phenylalanine 4.5 25 2 G glycine 5.2 29 2 H histidine 1.1 6 1 I isoleucine 4.0 22 1 K lysine 4.9 27 2 L leucine 9.5 53 3 M methionine 3.4 19 1 N asparagine 5.6 31 2 P proline 5.2 29 1 Q glutamine 4.1 23 2 R arginine 6.1 34 2 S serine 6.7 37 2 T threonine 5.9 33 2 V valine 6.5 36 1 W tryptophan 1.1 6 1 Y tyrosine 3.1 17 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 glypican 6 precursor GPC4 0.631 glypican 4 GPC1 0.443 glypican 1 precursor GPC2 0.386 glypican 2 GPC5 0.161 glypican 5 GPC3 0.142 glypican 3 ATP6V1C1 0.008 ATPase, H+ transporting, lysosomal V1 subunit C1 [Hom... LARP1B 0.007 La ribonucleoprotein domain family member 2 isoform ... MMEL1 0.007 membrane metallo-endopeptidase-like 1 PPIL5 0.005 peptidylprolyl isomerase (cyclophilin)-like 5 isofor... CPEB3 0.005 cytoplasmic polyadenylation element binding protein ... TEKT3 0.005 tektin 3 ARMCX6 0.005 armadillo repeat containing, X-linked 6 ARMCX6 0.005 armadillo repeat containing, X-linked 6 TLN1 0.004 talin 1 FBXO30 0.004 F-box only protein 30 CPZ 0.004 carboxypeptidase Z isoform 2 precursor CPZ 0.004 carboxypeptidase Z isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.