Guide to the Human Genome
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Name: GFRA4 Sequence: fasta or formatted (269aa) NCBI GI: 11545875
Description:

GDNF family receptor alpha 4 isoform a precursor

Referenced in:

Neurons

Other entries for this name:
alt prot [299aa] GDNF family receptor alpha 4 isoform b precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.8         37           2
 C cysteine            7.8         21           1
 D aspartate           3.7         10           1
 E glutamate           3.3          9           1
 F phenylalanine       3.7         10           2
 G glycine             8.2         22           2
 H histidine           0.7          2           1
 I isoleucine          0.7          2           1
 K lysine              0.0          0           0
 L leucine            13.8         37           7
 M methionine          0.4          1           1
 N asparagine          2.6          7           1
 P proline             8.9         24           2
 Q glutamine           3.7         10           1
 R arginine           11.5         31           3
 S serine              6.7         18           2
 T threonine           3.0          8           1
 V valine              5.6         15           1
 W tryptophan          0.7          2           1
 Y tyrosine            1.1          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   GDNF family receptor alpha 4 isoform a precursor [Ho... 
GFRA4                 0.828   GDNF family receptor alpha 4 isoform b precursor [Ho...
GFRA1                 0.311   GDNF family receptor alpha 1 isoform b preproprotei...
GFRA1                 0.311   GDNF family receptor alpha 1 isoform b preproprotein...
GFRA1                 0.311   GDNF family receptor alpha 1 isoform a preproprotein ...
GFRA2                 0.285   GDNF family receptor alpha 2 preproprotein 
GFRA3                 0.236   GDNF family receptor alpha 3 preproprotein 
GFRAL                 0.073   GDNF family receptor alpha like 
C10orf95              0.030   hypothetical protein LOC79946 
LOC339742             0.017   PREDICTED: hypothetical protein 
LAMA5                 0.017   laminin alpha 5 
VWC2                  0.017   von Willebrand factor C domain containing 2 
NOTCH3                0.015   Notch homolog 3 
LOC100133636          0.015   PREDICTED: similar to hCG1806822 
LAMA1                 0.015   laminin, alpha 1 precursor 
PRAGMIN               0.015   pragmin 
GAS1                  0.013   growth arrest-specific 1 
SSPO                  0.013   SCO-spondin 
ALPK3                 0.013   alpha-kinase 3 
KRTAP4-9              0.011   PREDICTED: keratin associated protein 4-9 
VSIG8                 0.011   V-set and immunoglobulin domain containing 8 
LOC100133638          0.009   PREDICTED: hypothetical protein 
LOC100288105          0.009   PREDICTED: hypothetical protein XP_002342609 
LOC339742             0.009   PREDICTED: hypothetical protein 
COL18A1               0.009   alpha 1 type XVIII collagen isoform 3 precursor [Ho...
MYO7A                 0.009   myosin VIIA isoform 2 
MYO7A                 0.009   myosin VIIA isoform 1 
KCP                   0.009   cysteine rich BMP regulator 2 isoform 2 
TNKS1BP1              0.009   tankyrase 1-binding protein 1 
LOC100288836          0.009   PREDICTED: hypothetical protein XP_002343912 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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