Guide to the Human Genome
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Name: ASH2L Sequence: fasta or formatted (628aa) NCBI GI: 157412280
Description:

ash2-like isoform a

Referenced in:

Histones, Related Proteins, and Modifying Enzymes

Other entries for this name:
alt prot [534aa] ash2-like isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         50           3
 C cysteine            1.8         11           1
 D aspartate           6.7         42           2
 E glutamate           6.8         43           2
 F phenylalanine       3.7         23           1
 G glycine            10.2         64           2
 H histidine           2.4         15           2
 I isoleucine          3.3         21           2
 K lysine              7.3         46           2
 L leucine             6.8         43           2
 M methionine          2.1         13           1
 N asparagine          3.3         21           2
 P proline             7.2         45           2
 Q glutamine           3.3         21           2
 R arginine            3.5         22           2
 S serine              7.2         45           2
 T threonine           5.7         36           2
 V valine              4.8         30           2
 W tryptophan          1.6         10           1
 Y tyrosine            4.3         27           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ash2-like isoform a 
ASH2L                 0.858   ash2-like isoform b 
RNF123                0.021   ring finger protein 123 
RYR3                  0.020   ryanodine receptor 3 
RYR2                  0.019   cardiac muscle ryanodine receptor 
RYR1                  0.018   skeletal muscle ryanodine receptor isoform 2 
RYR1                  0.018   skeletal muscle ryanodine receptor isoform 1 
HNRNPUL1              0.016   heterogeneous nuclear ribonucleoprotein U-like 1 iso...
HNRNPUL1              0.016   heterogeneous nuclear ribonucleoprotein U-like 1 iso...
RANBP9                0.016   RAN binding protein 9 
RANBP10               0.016   RAN binding protein 10 
HNRNPU                0.013   heterogeneous nuclear ribonucleoprotein U isoform b ...
RPGR                  0.013   retinitis pigmentosa GTPase regulator isoform C [Hom...
HNRNPU                0.013   heterogeneous nuclear ribonucleoprotein U isoform a ...
PER1                  0.012   period 1 
RSPRY1                0.012   ring finger and SPRY domain containing 1 
KIAA0323              0.012   hypothetical protein LOC23351 
EVX1                  0.011   even-skipped homeobox 1 
TAF10                 0.011   TBP-related factor 10 
CSRP2BP               0.011   CSRP2 binding protein isoform a 
TRIM33                0.010   tripartite motif-containing 33 protein isoform beta ...
TRIM33                0.010   tripartite motif-containing 33 protein isoform alpha...
RBBP6                 0.009   retinoblastoma-binding protein 6 isoform 2 
RBBP6                 0.009   retinoblastoma-binding protein 6 isoform 1 
BTBD2                 0.009   BTB (POZ) domain containing 2 
VWA1                  0.009   von Willebrand factor A domain containing 1 isoform ...
VWA1                  0.009   von Willebrand factor A domain containing 1 isoform ...
HCN2                  0.009   hyperpolarization activated cyclic nucleotide-gated...
OSBP                  0.009   oxysterol binding protein 
AFF4                  0.009   ALL1 fused gene from 5q31 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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