Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ASH2L Sequence: fasta or formatted (534aa) NCBI GI: 157412282
Description:

ash2-like isoform b

Referenced in:

Histones, Related Proteins, and Modifying Enzymes

Other entries for this name:
alt prot [628aa] ash2-like isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         30           2
 C cysteine            2.1         11           1
 D aspartate           7.3         39           2
 E glutamate           5.6         30           2
 F phenylalanine       4.3         23           1
 G glycine             8.2         44           2
 H histidine           2.8         15           2
 I isoleucine          3.7         20           2
 K lysine              8.2         44           2
 L leucine             7.5         40           2
 M methionine          2.1         11           1
 N asparagine          3.4         18           2
 P proline             6.9         37           2
 Q glutamine           3.7         20           2
 R arginine            4.1         22           2
 S serine              7.1         38           2
 T threonine           5.8         31           2
 V valine              4.5         24           2
 W tryptophan          1.9         10           1
 Y tyrosine            5.1         27           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ash2-like isoform b 
ASH2L                 1.000   ash2-like isoform a 
RNF123                0.024   ring finger protein 123 
RYR3                  0.024   ryanodine receptor 3 
RYR2                  0.022   cardiac muscle ryanodine receptor 
RYR1                  0.021   skeletal muscle ryanodine receptor isoform 2 
RYR1                  0.021   skeletal muscle ryanodine receptor isoform 1 
HNRNPUL2              0.021   heterogeneous nuclear ribonucleoprotein U-like 2 [H...
HNRNPUL1              0.018   heterogeneous nuclear ribonucleoprotein U-like 1 iso...
HNRNPUL1              0.018   heterogeneous nuclear ribonucleoprotein U-like 1 iso...
RANBP9                0.018   RAN binding protein 9 
RANBP10               0.018   RAN binding protein 10 
HNRNPU                0.015   heterogeneous nuclear ribonucleoprotein U isoform b ...
HNRNPU                0.015   heterogeneous nuclear ribonucleoprotein U isoform a ...
RSPRY1                0.014   ring finger and SPRY domain containing 1 
RBBP6                 0.011   retinoblastoma-binding protein 6 isoform 2 
RBBP6                 0.011   retinoblastoma-binding protein 6 isoform 1 
AFF4                  0.011   ALL1 fused gene from 5q31 
CSRP2BP               0.010   CSRP2 binding protein isoform a 
PHF1                  0.008   PHD finger protein 1 isoform a 
FBXL19                0.007   F-box and leucine-rich repeat protein 19 
DMKN                  0.007   dermokine isoform 4 precursor 
DMKN                  0.007   dermokine isoform 5 precursor 
DMKN                  0.007   dermokine isoform 3 precursor 
DMKN                  0.007   dermokine isoform 2 precursor 
ZMIZ2                 0.007   zinc finger, MIZ-type containing 2 isoform 1 
ZMIZ2                 0.007   zinc finger, MIZ-type containing 2 isoform 2 
CX3CL1                0.006   chemokine (C-X3-C motif) ligand 1 
UHRF1                 0.006   ubiquitin-like with PHD and ring finger domains 1 i...
UHRF1                 0.006   ubiquitin-like with PHD and ring finger domains 1 i...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press