Guide to the Human Genome
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Name: HNRNPUL2 Sequence: fasta or formatted (747aa) NCBI GI: 118601081
Description:

heterogeneous nuclear ribonucleoprotein U-like 2

Referenced in:

hnRNP

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         48           3
 C cysteine            1.3         10           1
 D aspartate           6.4         48           2
 E glutamate          13.5        101           6
 F phenylalanine       3.5         26           2
 G glycine             9.4         70           4
 H histidine           0.9          7           2
 I isoleucine          1.2          9           1
 K lysine              6.3         47           2
 L leucine             7.0         52           3
 M methionine          1.5         11           1
 N asparagine          3.9         29           2
 P proline             6.0         45           3
 Q glutamine           5.0         37           2
 R arginine            8.0         60           2
 S serine              5.1         38           1
 T threonine           2.9         22           1
 V valine              5.8         43           5
 W tryptophan          0.9          7           1
 Y tyrosine            5.0         37           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   heterogeneous nuclear ribonucleoprotein U-like 2 [H... 
HNRNPU                0.373   heterogeneous nuclear ribonucleoprotein U isoform b ...
HNRNPU                0.372   heterogeneous nuclear ribonucleoprotein U isoform a ...
HNRNPUL1              0.331   heterogeneous nuclear ribonucleoprotein U-like 1 iso...
HNRNPUL1              0.298   heterogeneous nuclear ribonucleoprotein U-like 1 iso...
DDX1                  0.055   DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 
CCDC96                0.029   coiled-coil domain containing 96 
RPGR                  0.028   retinitis pigmentosa GTPase regulator isoform C [Hom...
RANBP9                0.026   RAN binding protein 9 
NSBP1                 0.023   nucleosomal binding protein 1 
MICAL3                0.022   microtubule associated monoxygenase, calponin and L...
NCL                   0.020   nucleolin 
AEBP2                 0.020   AE binding protein 2 isoform b 
AEBP2                 0.020   AE binding protein 2 isoform a 
ANO8                  0.019   anoctamin 8 
TCOF1                 0.019   Treacher Collins-Franceschetti syndrome 1 isoform e...
TCOF1                 0.019   Treacher Collins-Franceschetti syndrome 1 isoform d...
TCOF1                 0.019   Treacher Collins-Franceschetti syndrome 1 isoform a ...
TCOF1                 0.019   Treacher Collins-Franceschetti syndrome 1 isoform c ...
RP1L1                 0.019   retinitis pigmentosa 1-like 1 
SLC24A1               0.018   solute carrier family 24 (sodium/potassium/calcium ex...
CENPB                 0.018   centromere protein B 
PAF1                  0.018   Paf1, RNA polymerase II associated factor, homolog [...
MAP3K1                0.018   mitogen-activated protein kinase kinase kinase 1 [H...
MAP1B                 0.018   microtubule-associated protein 1B 
SCAF1                 0.018   SR-related CTD-associated factor 1 
NEFM                  0.018   neurofilament, medium polypeptide 150kDa isoform 1 ...
NEFM                  0.018   neurofilament, medium polypeptide 150kDa isoform 2 ...
MYST3                 0.017   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.017   MYST histone acetyltransferase (monocytic leukemia)...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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