RPGR 36292

Name: RPGR	Sequence: fasta or formatted (1152aa)		NCBI GI: 78190492
Description: retinitis pigmentosa GTPase regulator isoform C		Referenced in: Protein Composition and Structure Crystallins and Other Eye Proteins Kidney Left-Right Axis Ran and Rag
Other entries for this name: alt prot [815aa] retinitis pigmentosa GTPase regulator isoform A
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.0 35 2 C cysteine 1.3 15 1 D aspartate 3.1 36 2 E glutamate 26.6 307 7 F phenylalanine 2.6 30 2 G glycine 15.5 178 2 H histidine 1.8 21 1 I isoleucine 2.5 29 1 K lysine 6.6 76 2 L leucine 5.4 62 2 M methionine 1.6 18 1 N asparagine 4.0 46 2 P proline 2.7 31 2 Q glutamine 3.3 38 2 R arginine 3.6 41 3 S serine 5.3 61 2 T threonine 4.5 52 2 V valine 4.5 52 2 W tryptophan 0.7 8 1 Y tyrosine 1.4 16 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 retinitis pigmentosa GTPase regulator isoform C [Hom... RPGR 0.545 retinitis pigmentosa GTPase regulator isoform A [Homo... RP1L1 0.082 retinitis pigmentosa 1-like 1 LOC100133758 0.065 PREDICTED: hypothetical protein, partial HERC3 0.059 hect domain and RLD 3 LOC283685 0.058 PREDICTED: golgi autoantigen, golgin subfamily a-li... HERC4 0.056 hect domain and RLD 4 isoform b HERC4 0.056 hect domain and RLD 4 isoform a LOC100286959 0.053 PREDICTED: hypothetical protein XP_002343921 LOC283685 0.053 PREDICTED: golgi autoantigen, golgin subfamily a-li... HERC1 0.053 guanine nucleotide exchange factor p532 LOC727832 0.050 golgi autoantigen, golgin subfamily a-like RCC1 0.050 regulator of chromosome condensation 1 isoform b [H... HERC6 0.049 hect domain and RLD 6 MDN1 0.049 MDN1, midasin homolog TCHH 0.049 trichohyalin HRC 0.048 histidine rich calcium binding protein precursor [Hom... RCC1 0.048 regulator of chromosome condensation 1 isoform a [H... RCC1 0.048 regulator of chromosome condensation 1 isoform c [Hom... SNHG3-RCC1 0.048 regulator of chromosome condensation 1 SNHG3-RCC1 0.048 regulator of chromosome condensation 1 SNHG3-RCC1 0.048 regulator of chromosome condensation 1 EIF5B 0.047 eukaryotic translation initiation factor 5B NEFM 0.046 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFM 0.046 neurofilament, medium polypeptide 150kDa isoform 2 ... RCBTB1 0.046 regulator of chromosome condensation (RCC1) and BTB ... HERC2 0.045 hect domain and RLD 2 SLC24A1 0.044 solute carrier family 24 (sodium/potassium/calcium ex... CLIC6 0.042 chloride intracellular channel 6 HTATSF1 0.042 HIV-1 Tat specific factor 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.