Guide to the Human Genome
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Name: RYR2 Sequence: fasta or formatted (4967aa) NCBI GI: 112799847
Description:

cardiac muscle ryanodine receptor

Referenced in:

Gene Structure
Muscle

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1        304           3
 C cysteine            1.8         90           2
 D aspartate           5.7        282           3
 E glutamate           8.3        410           4
 F phenylalanine       4.6        227           4
 G glycine             6.1        305           3
 H histidine           2.9        145           2
 I isoleucine          4.8        236           3
 K lysine              6.4        317           4
 L leucine            11.2        555           3
 M methionine          3.2        158           2
 N asparagine          3.9        192           3
 P proline             3.8        189           3
 Q glutamine           4.0        199           2
 R arginine            5.2        256           2
 S serine              7.1        353           3
 T threonine           4.5        222           2
 V valine              6.1        305           3
 W tryptophan          1.1         57           2
 Y tyrosine            3.3        165           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cardiac muscle ryanodine receptor 
RYR1                  0.662   skeletal muscle ryanodine receptor isoform 2 
RYR1                  0.662   skeletal muscle ryanodine receptor isoform 1 
RYR3                  0.494   ryanodine receptor 3 
ITPR2                 0.014   inositol 1,4,5-triphosphate receptor, type 2 
ITPR3                 0.014   inositol 1,4,5-triphosphate receptor, type 3 
ITPR1                 0.014   inositol 1,4,5-triphosphate receptor, type 1 isofor...
ITPR1                 0.014   inositol 1,4,5-triphosphate receptor, type 1 isofor...
RNF123                0.006   ring finger protein 123 
RSPRY1                0.004   ring finger and SPRY domain containing 1 
DDX1                  0.003   DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 
ASH2L                 0.002   ash2-like isoform b 
ASH2L                 0.002   ash2-like isoform a 
RANBP9                0.002   RAN binding protein 9 
MICAL3                0.002   microtubule associated monoxygenase, calponin and L...
HNRNPUL2              0.002   heterogeneous nuclear ribonucleoprotein U-like 2 [H...
MYT1                  0.002   myelin transcription factor 1 
NEFL                  0.002   neurofilament, light polypeptide 68kDa 
RANBP10               0.002   RAN binding protein 10 
WDR87                 0.002   NYD-SP11 protein 
TTBK1                 0.002   tau tubulin kinase 1 
CNGA1                 0.002   cyclic nucleotide gated channel alpha 1 isoform 1 [...
CNGA1                 0.002   cyclic nucleotide gated channel alpha 1 isoform 2 [H...
CDC2L2                0.002   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.002   cell division cycle 2-like 2 isoform 1 
CDC2L1                0.002   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.002   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.002   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.002   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.002   cell division cycle 2-like 1 (PITSLRE proteins) isof...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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