Guide to the Human Genome
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Name: FGF20 Sequence: fasta or formatted (211aa) NCBI GI: 9789947
Description:

fibroblast growth factor 20

Referenced in:

Fibroblast Growth Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         12           2
 C cysteine            0.9          2           1
 D aspartate           4.3          9           1
 E glutamate           6.6         14           2
 F phenylalanine       4.7         10           1
 G glycine            12.8         27           2
 H histidine           3.8          8           1
 I isoleucine          3.3          7           1
 K lysine              3.3          7           1
 L leucine            12.3         26           2
 M methionine          1.4          3           1
 N asparagine          2.4          5           1
 P proline             5.7         12           2
 Q glutamine           4.3          9           2
 R arginine            9.0         19           3
 S serine              6.2         13           2
 T threonine           3.8          8           1
 V valine              4.7         10           1
 W tryptophan          0.5          1           1
 Y tyrosine            4.3          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   fibroblast growth factor 20 
FGF9                  0.671   fibroblast growth factor 9 precursor 
FGF16                 0.605   fibroblast growth factor 16 
FGF14                 0.239   fibroblast growth factor 14 isoform 1B 
FGF14                 0.239   fibroblast growth factor 14 isoform 1A 
FGF5                  0.237   fibroblast growth factor 5 isoform 1 precursor [Homo...
FGF3                  0.237   fibroblast growth factor 3 precursor 
FGF22                 0.234   fibroblast growth factor 22 precursor 
FGF10                 0.232   fibroblast growth factor 10 precursor 
FGF13                 0.229   fibroblast growth factor 13 isoform 4 
FGF13                 0.227   fibroblast growth factor 13 isoform 3 
FGF13                 0.227   fibroblast growth factor 13 isoform 3 
FGF13                 0.227   fibroblast growth factor 13 isoform 2 
FGF13                 0.227   fibroblast growth factor 13 isoform 1 
FGF13                 0.227   fibroblast growth factor 13 isoform 5 
FGF7                  0.220   fibroblast growth factor 7 precursor 
FGF12                 0.220   fibroblast growth factor 12 isoform 2 
FGF12                 0.220   fibroblast growth factor 12 isoform 1 
FGF11                 0.205   fibroblast growth factor 11 
FGF6                  0.198   fibroblast growth factor 6 precursor 
FGF4                  0.190   fibroblast growth factor 4 precursor 
FGF1                  0.178   fibroblast growth factor 1 (acidic) isoform 1 propr...
FGF1                  0.178   fibroblast growth factor 1 (acidic) isoform 1 proprot...
FGF1                  0.178   fibroblast growth factor 1 (acidic) isoform 1 propr...
FGF1                  0.178   fibroblast growth factor 1 (acidic) isoform 1 propr...
FGF2                  0.139   fibroblast growth factor 2 
FGF8                  0.112   fibroblast growth factor 8 isoform E precursor [Homo...
FGF8                  0.107   fibroblast growth factor 8 isoform A precursor [Homo...
FGF8                  0.107   fibroblast growth factor 8 isoform B precursor 
FGF8                  0.107   fibroblast growth factor 8 isoform F precursor [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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