Guide to the Human Genome
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Name: FGF1 Sequence: fasta or formatted (155aa) NCBI GI: 222144271
Description:

fibroblast growth factor 1 (acidic) isoform 1 proprotein

Referenced in:

Fibroblast Growth Factors
Lung

Other entries for this name:
alt prot [60aa] fibroblast growth factor 1 (acidic) isoform 2
alt prot [59aa] fibroblast growth factor 1 (acidic) isoform 3
alt mRNA [155aa] fibroblast growth factor 1 (acidic) isoform 1 proprotein
alt mRNA [155aa] fibroblast growth factor 1 (acidic) isoform 1 proprotein
alt mRNA [155aa] fibroblast growth factor 1 (acidic) isoform 1 proprotein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.9          6           1
 C cysteine            1.9          3           1
 D aspartate           4.5          7           1
 E glutamate           7.7         12           2
 F phenylalanine       3.9          6           1
 G glycine             9.0         14           2
 H histidine           3.2          5           1
 I isoleucine          3.9          6           1
 K lysine              7.7         12           2
 L leucine            11.6         18           2
 M methionine          1.3          2           1
 N asparagine          5.2          8           1
 P proline             5.2          8           2
 Q glutamine           3.9          6           1
 R arginine            3.9          6           1
 S serine              6.5         10           2
 T threonine           7.7         12           2
 V valine              3.2          5           1
 W tryptophan          0.6          1           1
 Y tyrosine            5.2          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   fibroblast growth factor 1 (acidic) isoform 1 propr... 
FGF1                  1.000   fibroblast growth factor 1 (acidic) isoform 1 propr...
FGF1                  1.000   fibroblast growth factor 1 (acidic) isoform 1 proprot...
FGF1                  1.000   fibroblast growth factor 1 (acidic) isoform 1 propr...
FGF2                  0.452   fibroblast growth factor 2 
FGF1                  0.324   fibroblast growth factor 1 (acidic) isoform 2 
FGF1                  0.324   fibroblast growth factor 1 (acidic) isoform 3 
FGF9                  0.247   fibroblast growth factor 9 precursor 
FGF20                 0.244   fibroblast growth factor 20 
FGF16                 0.241   fibroblast growth factor 16 
FGF7                  0.197   fibroblast growth factor 7 precursor 
FGF14                 0.197   fibroblast growth factor 14 isoform 1B 
FGF14                 0.197   fibroblast growth factor 14 isoform 1A 
FGF3                  0.194   fibroblast growth factor 3 precursor 
FGF10                 0.191   fibroblast growth factor 10 precursor 
FGF13                 0.191   fibroblast growth factor 13 isoform 5 
FGF22                 0.191   fibroblast growth factor 22 precursor 
FGF13                 0.184   fibroblast growth factor 13 isoform 3 
FGF13                 0.184   fibroblast growth factor 13 isoform 3 
FGF13                 0.184   fibroblast growth factor 13 isoform 2 
FGF13                 0.184   fibroblast growth factor 13 isoform 4 
FGF13                 0.184   fibroblast growth factor 13 isoform 1 
FGF12                 0.184   fibroblast growth factor 12 isoform 2 
FGF12                 0.184   fibroblast growth factor 12 isoform 1 
FGF5                  0.174   fibroblast growth factor 5 isoform 1 precursor [Homo...
FGF11                 0.164   fibroblast growth factor 11 
FGF4                  0.157   fibroblast growth factor 4 precursor 
FGF6                  0.151   fibroblast growth factor 6 precursor 
FGF18                 0.137   fibroblast growth factor 18 precursor 
FGF21                 0.107   fibroblast growth factor 21 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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