Guide to the Human Genome
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Name: FGF11 Sequence: fasta or formatted (225aa) NCBI GI: 4758362
Description:

fibroblast growth factor 11

Referenced in:

Fibroblast Growth Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         19           3
 C cysteine            2.7          6           1
 D aspartate           1.8          4           1
 E glutamate           5.3         12           1
 F phenylalanine       3.6          8           1
 G glycine             7.6         17           2
 H histidine           2.2          5           1
 I isoleucine          2.7          6           1
 K lysine              6.2         14           2
 L leucine            10.7         24           2
 M methionine          2.2          5           1
 N asparagine          2.2          5           1
 P proline             8.0         18           2
 Q glutamine           5.3         12           1
 R arginine            8.4         19           2
 S serine              8.4         19           2
 T threonine           3.6          8           1
 V valine              6.2         14           2
 W tryptophan          0.4          1           1
 Y tyrosine            4.0          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   fibroblast growth factor 11 
FGF14                 0.574   fibroblast growth factor 14 isoform 1A 
FGF12                 0.572   fibroblast growth factor 12 isoform 1 
FGF13                 0.516   fibroblast growth factor 13 isoform 1 
FGF14                 0.486   fibroblast growth factor 14 isoform 1B 
FGF12                 0.454   fibroblast growth factor 12 isoform 2 
FGF13                 0.447   fibroblast growth factor 13 isoform 4 
FGF13                 0.442   fibroblast growth factor 13 isoform 3 
FGF13                 0.442   fibroblast growth factor 13 isoform 3 
FGF13                 0.442   fibroblast growth factor 13 isoform 2 
FGF13                 0.442   fibroblast growth factor 13 isoform 5 
FGF9                  0.201   fibroblast growth factor 9 precursor 
FGF20                 0.194   fibroblast growth factor 20 
FGF16                 0.183   fibroblast growth factor 16 
FGF5                  0.162   fibroblast growth factor 5 isoform 1 precursor [Homo...
FGF22                 0.155   fibroblast growth factor 22 precursor 
FGF3                  0.153   fibroblast growth factor 3 precursor 
FGF7                  0.150   fibroblast growth factor 7 precursor 
FGF4                  0.148   fibroblast growth factor 4 precursor 
FGF6                  0.134   fibroblast growth factor 6 precursor 
FGF10                 0.132   fibroblast growth factor 10 precursor 
FGF1                  0.113   fibroblast growth factor 1 (acidic) isoform 1 propr...
FGF1                  0.113   fibroblast growth factor 1 (acidic) isoform 1 proprot...
FGF1                  0.113   fibroblast growth factor 1 (acidic) isoform 1 propr...
FGF1                  0.113   fibroblast growth factor 1 (acidic) isoform 1 propr...
FGF2                  0.090   fibroblast growth factor 2 
FGF18                 0.058   fibroblast growth factor 18 precursor 
FGF8                  0.053   fibroblast growth factor 8 isoform A precursor [Homo...
FGF8                  0.053   fibroblast growth factor 8 isoform B precursor 
FGF8                  0.053   fibroblast growth factor 8 isoform E precursor [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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