Guide to the Human Genome
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Name: FGF13 Sequence: fasta or formatted (226aa) NCBI GI: 213417614
Description:

fibroblast growth factor 13 isoform 3

Referenced in:

Fibroblast Growth Factors

Other entries for this name:
alt prot [192aa] fibroblast growth factor 13 isoform 5
alt prot [199aa] fibroblast growth factor 13 isoform 4
alt prot [255aa] fibroblast growth factor 13 isoform 2
alt mRNA [226aa] fibroblast growth factor 13 isoform 3
alt prot [245aa] fibroblast growth factor 13 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.5          8           2
 C cysteine            1.8          4           2
 D aspartate           2.7          6           1
 E glutamate           8.0         18           2
 F phenylalanine       3.5          8           1
 G glycine             7.5         17           2
 H histidine           3.5          8           2
 I isoleucine          3.5          8           1
 K lysine              9.7         22           3
 L leucine             9.3         21           1
 M methionine          2.7          6           1
 N asparagine          4.0          9           1
 P proline             4.9         11           1
 Q glutamine           5.3         12           3
 R arginine            3.5          8           1
 S serine              9.3         21           2
 T threonine           6.2         14           1
 V valine              5.3         12           2
 W tryptophan          0.4          1           1
 Y tyrosine            5.3         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   fibroblast growth factor 13 isoform 3 
FGF13                 1.000   fibroblast growth factor 13 isoform 3 
FGF13                 1.000   fibroblast growth factor 13 isoform 2 
FGF13                 0.797   fibroblast growth factor 13 isoform 4 
FGF13                 0.795   fibroblast growth factor 13 isoform 1 
FGF13                 0.795   fibroblast growth factor 13 isoform 5 
FGF14                 0.591   fibroblast growth factor 14 isoform 1B 
FGF14                 0.580   fibroblast growth factor 14 isoform 1A 
FGF12                 0.550   fibroblast growth factor 12 isoform 2 
FGF12                 0.546   fibroblast growth factor 12 isoform 1 
FGF11                 0.436   fibroblast growth factor 11 
FGF9                  0.221   fibroblast growth factor 9 precursor 
FGF20                 0.212   fibroblast growth factor 20 
FGF16                 0.205   fibroblast growth factor 16 
FGF10                 0.167   fibroblast growth factor 10 precursor 
FGF5                  0.162   fibroblast growth factor 5 isoform 1 precursor [Homo...
FGF7                  0.158   fibroblast growth factor 7 precursor 
FGF3                  0.151   fibroblast growth factor 3 precursor 
FGF6                  0.148   fibroblast growth factor 6 precursor 
FGF4                  0.139   fibroblast growth factor 4 precursor 
FGF1                  0.126   fibroblast growth factor 1 (acidic) isoform 1 propr...
FGF1                  0.126   fibroblast growth factor 1 (acidic) isoform 1 proprot...
FGF1                  0.126   fibroblast growth factor 1 (acidic) isoform 1 propr...
FGF1                  0.126   fibroblast growth factor 1 (acidic) isoform 1 propr...
FGF22                 0.123   fibroblast growth factor 22 precursor 
FGF2                  0.100   fibroblast growth factor 2 
FGF18                 0.073   fibroblast growth factor 18 precursor 
FGF8                  0.068   fibroblast growth factor 8 isoform A precursor [Homo...
FGF8                  0.068   fibroblast growth factor 8 isoform B precursor 
FGF8                  0.068   fibroblast growth factor 8 isoform E precursor [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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