Guide to the Human Genome
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Name: FGF8 Sequence: fasta or formatted (215aa) NCBI GI: 5174439
Description:

fibroblast growth factor 8 isoform B precursor

Referenced in:

Fibroblast Growth Factors
Stem Cells and Early Development

Other entries for this name:
alt prot [244aa] fibroblast growth factor 8 isoform F precursor
alt prot [233aa] fibroblast growth factor 8 isoform E precursor
alt prot [204aa] fibroblast growth factor 8 isoform A precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         12           1
 C cysteine            1.9          4           1
 D aspartate           2.3          5           1
 E glutamate           5.1         11           1
 F phenylalanine       4.2          9           1
 G glycine             6.5         14           1
 H histidine           3.3          7           2
 I isoleucine          2.8          6           1
 K lysine              6.5         14           2
 L leucine            10.2         22           3
 M methionine          2.3          5           1
 N asparagine          4.2          9           2
 P proline             4.2          9           2
 Q glutamine           6.0         13           1
 R arginine           10.2         22           2
 S serine              7.0         15           2
 T threonine           7.4         16           2
 V valine              6.0         13           1
 W tryptophan          0.9          2           1
 Y tyrosine            3.3          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   fibroblast growth factor 8 isoform B precursor 
FGF8                  0.964   fibroblast growth factor 8 isoform F precursor [Homo...
FGF8                  0.930   fibroblast growth factor 8 isoform A precursor [Homo...
FGF8                  0.922   fibroblast growth factor 8 isoform E precursor [Homo...
FGF17                 0.556   fibroblast growth factor 17 precursor 
FGF18                 0.500   fibroblast growth factor 18 precursor 
FGF9                  0.119   fibroblast growth factor 9 precursor 
FGF6                  0.114   fibroblast growth factor 6 precursor 
FGF16                 0.114   fibroblast growth factor 16 
FGF20                 0.107   fibroblast growth factor 20 
FGF2                  0.104   fibroblast growth factor 2 
FGF7                  0.102   fibroblast growth factor 7 precursor 
FGF4                  0.090   fibroblast growth factor 4 precursor 
FGF10                 0.080   fibroblast growth factor 10 precursor 
FGF3                  0.078   fibroblast growth factor 3 precursor 
FGF13                 0.073   fibroblast growth factor 13 isoform 3 
FGF13                 0.073   fibroblast growth factor 13 isoform 3 
FGF13                 0.073   fibroblast growth factor 13 isoform 2 
FGF13                 0.073   fibroblast growth factor 13 isoform 4 
FGF13                 0.073   fibroblast growth factor 13 isoform 1 
FGF13                 0.073   fibroblast growth factor 13 isoform 5 
FGF1                  0.070   fibroblast growth factor 1 (acidic) isoform 1 propr...
FGF1                  0.070   fibroblast growth factor 1 (acidic) isoform 1 proprot...
FGF1                  0.070   fibroblast growth factor 1 (acidic) isoform 1 propr...
FGF1                  0.070   fibroblast growth factor 1 (acidic) isoform 1 propr...
FGF5                  0.068   fibroblast growth factor 5 isoform 1 precursor [Homo...
FGF14                 0.058   fibroblast growth factor 14 isoform 1B 
FGF14                 0.058   fibroblast growth factor 14 isoform 1A 
FGF22                 0.058   fibroblast growth factor 22 precursor 
FGF11                 0.056   fibroblast growth factor 11 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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