Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: AGBL5 Sequence: fasta or formatted (717aa) NCBI GI: 78482633
Description:

ATP/GTP binding protein-like 5 isoform 3

Referenced in:

Carboxypeptidases

Other entries for this name:
alt prot [886aa] ATP/GTP binding protein-like 5 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         42           2
 C cysteine            2.2         16           1
 D aspartate           4.0         29           2
 E glutamate           5.4         39           2
 F phenylalanine       5.3         38           2
 G glycine             7.7         55           3
 H histidine           3.8         27           2
 I isoleucine          2.8         20           2
 K lysine              3.6         26           2
 L leucine             8.6         62           2
 M methionine          2.1         15           1
 N asparagine          5.2         37           2
 P proline             7.4         53           5
 Q glutamine           3.6         26           2
 R arginine            7.4         53           2
 S serine             10.9         78           4
 T threonine           4.6         33           2
 V valine              5.3         38           2
 W tryptophan          1.3          9           1
 Y tyrosine            2.9         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ATP/GTP binding protein-like 5 isoform 3 
AGBL5                 0.964   ATP/GTP binding protein-like 5 isoform 1 
AGBL4                 0.100   ATP/GTP binding protein-like 4 
AGTPBP1               0.084   ATP/GTP binding protein 1 
AGBL3                 0.079   carboxypeptidase 3, cytosolic 
AGBL2                 0.077   carboxypeptidase 2, cytosolic 
AGBL1                 0.074   ATP/GTP binding protein-like 1 
ZC3H18                0.007   zinc finger CCCH-type containing 18 
MAP2                  0.006   microtubule-associated protein 2 isoform 2 
MAP2                  0.006   microtubule-associated protein 2 isoform 4 
HRNR                  0.005   hornerin 
LOC441239             0.005   PREDICTED: hypothetical protein LOC441239 
LOC441239             0.005   PREDICTED: hypothetical protein LOC441239 
ARHGEF17              0.005   Rho guanine nucleotide exchange factor (GEF) 17 [Hom...
DDX42                 0.005   DEAD box polypeptide 42 protein 
DDX42                 0.005   DEAD box polypeptide 42 protein 
MAFA                  0.004   v-maf musculoaponeurotic fibrosarcoma oncogene homol...
ZNF536                0.004   zinc finger protein 536 
FES                   0.004   feline sarcoma oncogene isoform 4 
FES                   0.004   feline sarcoma oncogene isoform 3 
SEPP1                 0.004   selenoprotein P isoform 1 precursor 
SEPP1                 0.004   selenoprotein P isoform 2 
SEPP1                 0.004   selenoprotein P isoform 1 precursor 
EP300                 0.003   E1A binding protein p300 
FLJ22184              0.003   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.003   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.003   PREDICTED: hypothetical protein LOC80164 
PPRC1                 0.003   peroxisome proliferator-activated receptor gamma, co...
GTF2E2                0.003   general transcription factor IIE, polypeptide 2, beta...
LOC441239             0.003   PREDICTED: hypothetical protein LOC441239 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press