Guide to the Human Genome
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Name: AGBL4 Sequence: fasta or formatted (503aa) NCBI GI: 190194403
Description:

ATP/GTP binding protein-like 4

Referenced in:

Carboxypeptidases
Gene Structure

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.4         22           2
 C cysteine            2.2         11           1
 D aspartate           5.6         28           2
 E glutamate           5.2         26           2
 F phenylalanine       6.4         32           2
 G glycine             6.0         30           2
 H histidine           2.6         13           1
 I isoleucine          4.4         22           2
 K lysine              5.6         28           2
 L leucine             7.2         36           2
 M methionine          2.8         14           2
 N asparagine          5.4         27           1
 P proline             6.6         33           2
 Q glutamine           4.2         21           2
 R arginine            6.6         33           2
 S serine              7.0         35           2
 T threonine           4.6         23           2
 V valine              6.6         33           2
 W tryptophan          0.8          4           1
 Y tyrosine            6.4         32           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ATP/GTP binding protein-like 4 
AGBL3                 0.208   carboxypeptidase 3, cytosolic 
AGBL2                 0.204   carboxypeptidase 2, cytosolic 
AGBL1                 0.181   ATP/GTP binding protein-like 1 
AGTPBP1               0.178   ATP/GTP binding protein 1 
AGBL5                 0.142   ATP/GTP binding protein-like 5 isoform 1 
AGBL5                 0.142   ATP/GTP binding protein-like 5 isoform 3 
SMAD1                 0.010   Sma- and Mad-related protein 1 
SMAD1                 0.010   Sma- and Mad-related protein 1 
CPD                   0.010   carboxypeptidase D precursor 
CPA5                  0.008   carboxypeptidase A5 isoform 2 
CPA5                  0.007   carboxypeptidase A5 isoform 1 
CPA5                  0.007   carboxypeptidase A5 isoform 1 
PPM1B                 0.006   protein phosphatase 1B isoform 5 
PPM1B                 0.006   protein phosphatase 1B isoform 4 
PPM1B                 0.006   protein phosphatase 1B isoform 2 
PPM1B                 0.006   protein phosphatase 1B isoform 1 
HEG1                  0.005   HEG homolog 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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