Guide to the Human Genome
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Name: TAS2R40 Sequence: fasta or formatted (323aa) NCBI GI: 28882033
Description:

taste receptor, type 2, member 40

Referenced in:

Taste Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         20           2
 C cysteine            0.9          3           1
 D aspartate           2.2          7           1
 E glutamate           1.5          5           1
 F phenylalanine       8.0         26           2
 G glycine             4.6         15           1
 H histidine           2.2          7           1
 I isoleucine          9.6         31           2
 K lysine              5.0         16           2
 L leucine            13.6         44           3
 M methionine          4.0         13           2
 N asparagine          5.9         19           1
 P proline             3.4         11           1
 Q glutamine           1.9          6           1
 R arginine            4.0         13           2
 S serine              9.0         29           2
 T threonine           5.9         19           1
 V valine              6.2         20           2
 W tryptophan          2.2          7           1
 Y tyrosine            3.7         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   taste receptor, type 2, member 40 
TAS2R39               0.531   taste receptor, type 2, member 39 
TAS2R9                0.217   taste receptor, type 2, member 9 
TAS2R7                0.202   taste receptor, type 2, member 7 
TAS2R8                0.197   taste receptor, type 2, member 8 
TAS2R1                0.184   taste receptor T2R1 
TAS2R3                0.175   taste receptor T2R3 
TAS2R4                0.170   taste receptor T2R4 
TAS2R41               0.167   taste receptor, type 2, member 41 
TAS2R10               0.163   taste receptor, type 2, member 10 
TAS2R60               0.162   taste receptor, type 2, member 60 
TAS2R14               0.160   taste receptor, type 2, member 14 
TAS2R5                0.155   taste receptor T2R5 
TAS2R13               0.150   taste receptor, type 2, member 13 
TAS2R43               0.144   taste receptor, type 2, member 43 
TAS2R46               0.141   taste receptor, type 2, member 46 
TAS2R30               0.139   type 2 taste receptor member 30 
TAS2R16               0.138   taste receptor T2R16 
TAS2R20               0.134   taste receptor, type 2, member 20 
TAS2R38               0.133   taste receptor, type 2, member 38 
TAS2R31               0.128   taste receptor, type 2, member 31 
TAS2R19               0.128   taste receptor, type 2, member 19 
TAS2R42               0.121   taste receptor, type 2, member 42 
TAS2R50               0.105   taste receptor, type 2, member 50 
TAS2R45               0.102   taste receptor, type 2, member 45 
SSTR2                 0.013   somatostatin receptor 2 
CCR7                  0.011   chemokine (C-C motif) receptor 7 precursor 
RNFT1                 0.010   PTD016 protein 
OPRK1                 0.008   opioid receptor, kappa 1 
GPR32                 0.008   G protein-coupled receptor 32 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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