Guide to the Human Genome
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Name: TAS2R39 Sequence: fasta or formatted (338aa) NCBI GI: 116875819
Description:

taste receptor, type 2, member 39

Referenced in:

Taste Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         26           2
 C cysteine            2.1          7           1
 D aspartate           1.8          6           1
 E glutamate           3.0         10           1
 F phenylalanine       8.0         27           3
 G glycine             3.3         11           1
 H histidine           2.4          8           1
 I isoleucine         10.4         35           2
 K lysine              3.8         13           2
 L leucine            14.8         50           2
 M methionine          3.6         12           2
 N asparagine          5.3         18           2
 P proline             3.6         12           2
 Q glutamine           2.1          7           2
 R arginine            3.3         11           2
 S serine             10.1         34           2
 T threonine           4.7         16           1
 V valine              3.8         13           2
 W tryptophan          2.7          9           1
 Y tyrosine            3.8         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   taste receptor, type 2, member 39 
TAS2R40               0.502   taste receptor, type 2, member 40 
TAS2R7                0.198   taste receptor, type 2, member 7 
TAS2R8                0.196   taste receptor, type 2, member 8 
TAS2R9                0.184   taste receptor, type 2, member 9 
TAS2R4                0.173   taste receptor T2R4 
TAS2R13               0.170   taste receptor, type 2, member 13 
TAS2R42               0.167   taste receptor, type 2, member 42 
TAS2R3                0.167   taste receptor T2R3 
TAS2R1                0.164   taste receptor T2R1 
TAS2R41               0.164   taste receptor, type 2, member 41 
TAS2R10               0.164   taste receptor, type 2, member 10 
TAS2R14               0.159   taste receptor, type 2, member 14 
TAS2R60               0.152   taste receptor, type 2, member 60 
TAS2R30               0.149   type 2 taste receptor member 30 
TAS2R46               0.149   taste receptor, type 2, member 46 
TAS2R31               0.149   taste receptor, type 2, member 31 
TAS2R43               0.144   taste receptor, type 2, member 43 
TAS2R38               0.142   taste receptor, type 2, member 38 
TAS2R5                0.139   taste receptor T2R5 
TAS2R20               0.127   taste receptor, type 2, member 20 
TAS2R45               0.126   taste receptor, type 2, member 45 
TAS2R16               0.123   taste receptor T2R16 
TAS2R19               0.119   taste receptor, type 2, member 19 
TAS2R50               0.119   taste receptor, type 2, member 50 
OR1S1                 0.020   olfactory receptor, family 1, subfamily S, member 1 ...
OR1S2                 0.018   olfactory receptor, family 1, subfamily S, member 2 ...
OPRK1                 0.018   opioid receptor, kappa 1 
OXER1                 0.014   G-protein coupled receptor TG1019 
SLC45A1               0.012   DNB5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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