Guide to the Human Genome
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Name: OPRK1 Sequence: fasta or formatted (380aa) NCBI GI: 39725940
Description:

opioid receptor, kappa 1

Referenced in:

Peptide and Protein G-coupled Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         25           2
 C cysteine            3.2         12           1
 D aspartate           5.3         20           3
 E glutamate           2.6         10           1
 F phenylalanine       6.1         23           1
 G glycine             3.9         15           2
 H histidine           1.1          4           1
 I isoleucine          9.5         36           3
 K lysine              3.4         13           1
 L leucine             9.2         35           2
 M methionine          3.4         13           2
 N asparagine          3.7         14           1
 P proline             5.8         22           2
 Q glutamine           1.6          6           1
 R arginine            5.0         19           2
 S serine              8.7         33           3
 T threonine           5.8         22           3
 V valine              9.7         37           3
 W tryptophan          1.8          7           2
 Y tyrosine            3.7         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   opioid receptor, kappa 1 
OPRM1                 0.555   opioid receptor, mu 1 isoform MOR-1B5 
OPRM1                 0.555   opioid receptor, mu 1 isoform MOR-1A 
OPRM1                 0.554   opioid receptor, mu 1 isoform MOR-1H 
OPRM1                 0.554   opioid receptor, mu 1 isoform MOR-1 
OPRM1                 0.554   opioid receptor, mu 1 isoform MOR-1B2 
OPRM1                 0.554   opioid receptor, mu 1 isoform MOR-1B3 
OPRM1                 0.554   opioid receptor, mu 1 isoform MOR-1B1 
OPRM1                 0.554   opioid receptor, mu 1 isoform MOR-1B4 
OPRM1                 0.554   opioid receptor, mu 1 isoform MOR-1O 
OPRM1                 0.554   opioid receptor, mu 1 isoform MOR-1X 
OPRD1                 0.524   opioid receptor, delta 1 
OPRM1                 0.509   opioid receptor, mu 1 isoform MOR-1G2 
OPRM1                 0.499   opioid receptor, mu 1 isoform MOR-1G1 
OPRM1                 0.499   opioid receptor, mu 1 isoform MOR1-K1 
OPRL1                 0.474   opiate receptor-like 1 
OPRL1                 0.474   opiate receptor-like 1 
SSTR1                 0.315   somatostatin receptor 1 
SSTR4                 0.313   somatostatin receptor 4 
SSTR2                 0.294   somatostatin receptor 2 
NPBWR2                0.276   neuropeptides B/W receptor 2 
SSTR5                 0.265   somatostatin receptor 5 
SSTR3                 0.265   somatostatin receptor 3 
NPBWR1                0.252   G protein-coupled receptor 7 
CCR1                  0.206   chemokine (C-C motif) receptor 1 
AGTR1                 0.194   angiotensin II receptor, type 1 
AGTR1                 0.194   angiotensin II receptor, type 1 
AGTR1                 0.194   angiotensin II receptor, type 1 
AGTR1                 0.194   angiotensin II receptor, type 1 
AGTR1                 0.194   angiotensin II receptor, type 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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