Guide to the Human Genome
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Name: TAS2R42 Sequence: fasta or formatted (314aa) NCBI GI: 31088852
Description:

taste receptor, type 2, member 42

Referenced in:

Taste Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         15           1
 C cysteine            1.3          4           1
 D aspartate           2.9          9           1
 E glutamate           1.9          6           1
 F phenylalanine       9.6         30           2
 G glycine             3.2         10           1
 H histidine           3.2         10           1
 I isoleucine          9.2         29           2
 K lysine              4.8         15           1
 L leucine            20.1         63           2
 M methionine          3.8         12           1
 N asparagine          4.8         15           2
 P proline             1.6          5           1
 Q glutamine           1.3          4           1
 R arginine            3.5         11           2
 S serine              9.2         29           2
 T threonine           6.4         20           2
 V valine              4.5         14           1
 W tryptophan          1.9          6           1
 Y tyrosine            2.2          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   taste receptor, type 2, member 42 
TAS2R7                0.356   taste receptor, type 2, member 7 
TAS2R10               0.279   taste receptor, type 2, member 10 
TAS2R8                0.277   taste receptor, type 2, member 8 
TAS2R3                0.272   taste receptor T2R3 
TAS2R14               0.269   taste receptor, type 2, member 14 
TAS2R46               0.255   taste receptor, type 2, member 46 
TAS2R43               0.253   taste receptor, type 2, member 43 
TAS2R30               0.252   type 2 taste receptor member 30 
TAS2R9                0.242   taste receptor, type 2, member 9 
TAS2R13               0.242   taste receptor, type 2, member 13 
TAS2R31               0.240   taste receptor, type 2, member 31 
TAS2R45               0.235   taste receptor, type 2, member 45 
TAS2R20               0.233   taste receptor, type 2, member 20 
TAS2R50               0.218   taste receptor, type 2, member 50 
TAS2R19               0.215   taste receptor, type 2, member 19 
TAS2R39               0.184   taste receptor, type 2, member 39 
TAS2R1                0.176   taste receptor T2R1 
TAS2R38               0.169   taste receptor, type 2, member 38 
TAS2R41               0.167   taste receptor, type 2, member 41 
TAS2R5                0.128   taste receptor T2R5 
TAS2R40               0.127   taste receptor, type 2, member 40 
TAS2R60               0.125   taste receptor, type 2, member 60 
TAS2R4                0.125   taste receptor T2R4 
TAS2R16               0.108   taste receptor T2R16 
OR2G2                 0.025   olfactory receptor, family 2, subfamily G, member 2 ...
PTAFR                 0.017   platelet-activating factor receptor 
AGTR1                 0.017   angiotensin II receptor, type 1 
AGTR1                 0.017   angiotensin II receptor, type 1 
AGTR1                 0.017   angiotensin II receptor, type 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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