Guide to the Human Genome
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Name: RHOU Sequence: fasta or formatted (258aa) NCBI GI: 11034843
Description:

ras homolog gene family, member U

Referenced in:

Rho and Rac

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         18           2
 C cysteine            4.7         12           2
 D aspartate           5.8         15           1
 E glutamate           6.6         17           2
 F phenylalanine       3.5          9           1
 G glycine             8.5         22           2
 H histidine           0.4          1           1
 I isoleucine          3.9         10           2
 K lysine              8.1         21           2
 L leucine             6.2         16           2
 M methionine          0.8          2           1
 N asparagine          2.3          6           1
 P proline             8.5         22           2
 Q glutamine           4.3         11           3
 R arginine            5.8         15           2
 S serine              6.6         17           2
 T threonine           4.7         12           2
 V valine              8.5         22           2
 W tryptophan          1.2          3           2
 Y tyrosine            2.7          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ras homolog gene family, member U 
RHOV                  0.481   ras homolog gene family, member V 
CDC42                 0.411   cell division cycle 42 isoform 2 
CDC42                 0.411   cell division cycle 42 isoform 1 
CDC42                 0.411   cell division cycle 42 isoform 1 
RAC1                  0.376   ras-related C3 botulinum toxin substrate 1 isoform Ra...
RAC2                  0.376   ras-related C3 botulinum toxin substrate 2 
RAC3                  0.368   ras-related C3 botulinum toxin substrate 3 (rho famil...
RHOQ                  0.359   ras-like protein TC10 
RAC1                  0.355   ras-related C3 botulinum toxin substrate 1 isoform Ra...
RHOJ                  0.343   ras homolog gene family, member J 
RHOG                  0.331   ras homolog gene family, member G 
RHOC                  0.312   ras homolog gene family, member C precursor 
RHOC                  0.312   ras homolog gene family, member C precursor 
RHOC                  0.312   ras homolog gene family, member C precursor 
RHOB                  0.304   ras homolog gene family, member B 
RHOA                  0.302   ras homolog gene family, member A 
RHOD                  0.257   ras homolog D 
RHOF                  0.257   ras homolog gene family, member F 
RND3                  0.238   ras homolog gene family, member E 
RHOH                  0.232   ras homolog gene family, member H 
RND2                  0.226   Rho family GTPase 2 
RND1                  0.207   GTP-binding protein RHO6 
RHOBTB2               0.156   Rho-related BTB domain containing 2 isoform 3 [Homo...
RHOBTB2               0.156   Rho-related BTB domain containing 2 isoform 2 [Homo...
RHOBTB2               0.156   Rho-related BTB domain containing 2 isoform 1 [Homo...
RHOBTB1               0.150   Rho-related BTB domain containing 1 
RRAS                  0.135   related RAS viral (r-ras) oncogene homolog 
RALB                  0.129   v-ral simian leukemia viral oncogene homolog B 
RAB21                 0.119   RAB21, member RAS oncogene family 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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