Guide to the Human Genome
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Name: RAC1 Sequence: fasta or formatted (211aa) NCBI GI: 9845509
Description:

ras-related C3 botulinum toxin substrate 1 isoform Rac1b

Referenced in:

ADP-Ribosylation Factors
Rho and Rac
Superoxide Pathway

Other entries for this name:
alt prot [192aa] ras-related C3 botulinum toxin substrate 1 isoform Rac1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         14           1
 C cysteine            3.3          7           1
 D aspartate           6.6         14           2
 E glutamate           4.7         10           1
 F phenylalanine       2.8          6           1
 G glycine             6.6         14           1
 H histidine           0.9          2           2
 I isoleucine          5.7         12           2
 K lysine              9.5         20           2
 L leucine            10.0         21           3
 M methionine          1.4          3           1
 N asparagine          2.8          6           1
 P proline             7.1         15           3
 Q glutamine           2.4          5           1
 R arginine            4.7         10           1
 S serine              3.8          8           1
 T threonine           7.1         15           2
 V valine              8.5         18           3
 W tryptophan          0.9          2           1
 Y tyrosine            4.3          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ras-related C3 botulinum toxin substrate 1 isoform Ra... 
RAC1                  0.878   ras-related C3 botulinum toxin substrate 1 isoform Ra...
RAC3                  0.826   ras-related C3 botulinum toxin substrate 3 (rho famil...
RAC2                  0.812   ras-related C3 botulinum toxin substrate 2 
CDC42                 0.609   cell division cycle 42 isoform 1 
CDC42                 0.609   cell division cycle 42 isoform 1 
CDC42                 0.604   cell division cycle 42 isoform 2 
RHOG                  0.599   ras homolog gene family, member G 
RHOQ                  0.526   ras-like protein TC10 
RHOJ                  0.496   ras homolog gene family, member J 
RHOA                  0.445   ras homolog gene family, member A 
RHOU                  0.445   ras homolog gene family, member U 
RHOC                  0.443   ras homolog gene family, member C precursor 
RHOC                  0.443   ras homolog gene family, member C precursor 
RHOC                  0.443   ras homolog gene family, member C precursor 
RHOB                  0.428   ras homolog gene family, member B 
RHOV                  0.421   ras homolog gene family, member V 
RHOD                  0.408   ras homolog D 
RHOF                  0.389   ras homolog gene family, member F 
RND2                  0.330   Rho family GTPase 2 
RND3                  0.328   ras homolog gene family, member E 
RHOH                  0.298   ras homolog gene family, member H 
RND1                  0.271   GTP-binding protein RHO6 
RHOBTB2               0.232   Rho-related BTB domain containing 2 isoform 3 [Homo...
RHOBTB2               0.232   Rho-related BTB domain containing 2 isoform 2 [Homo...
RHOBTB2               0.232   Rho-related BTB domain containing 2 isoform 1 [Homo...
RHOBTB1               0.230   Rho-related BTB domain containing 1 
RIT1                  0.139   Ras-like without CAAX 1 
RAB9B                 0.137   RAB9B, member RAS oncogene family 
RAP2B                 0.134   RAP2B, member of RAS oncogene family 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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