Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: RAC2 Sequence: fasta or formatted (192aa) NCBI GI: 4506381
Description:

ras-related C3 botulinum toxin substrate 2

Referenced in:

Rho and Rac
Superoxide Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         14           1
 C cysteine            3.6          7           1
 D aspartate           6.8         13           2
 E glutamate           4.7          9           1
 F phenylalanine       3.1          6           1
 G glycine             4.7          9           1
 H histidine           1.0          2           2
 I isoleucine          5.2         10           2
 K lysine              7.3         14           2
 L leucine            10.9         21           2
 M methionine          1.0          2           1
 N asparagine          2.6          5           1
 P proline             6.8         13           1
 Q glutamine           4.2          8           2
 R arginine            4.7          9           1
 S serine              5.7         11           1
 T threonine           6.8         13           2
 V valine              8.3         16           3
 W tryptophan          1.0          2           1
 Y tyrosine            4.2          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ras-related C3 botulinum toxin substrate 2 
RAC1                  0.935   ras-related C3 botulinum toxin substrate 1 isoform Ra...
RAC3                  0.908   ras-related C3 botulinum toxin substrate 3 (rho famil...
RAC1                  0.902   ras-related C3 botulinum toxin substrate 1 isoform Ra...
CDC42                 0.690   cell division cycle 42 isoform 2 
CDC42                 0.682   cell division cycle 42 isoform 1 
CDC42                 0.682   cell division cycle 42 isoform 1 
RHOG                  0.679   ras homolog gene family, member G 
RHOQ                  0.595   ras-like protein TC10 
RHOJ                  0.562   ras homolog gene family, member J 
RHOU                  0.524   ras homolog gene family, member U 
RHOC                  0.503   ras homolog gene family, member C precursor 
RHOC                  0.503   ras homolog gene family, member C precursor 
RHOC                  0.503   ras homolog gene family, member C precursor 
RHOA                  0.497   ras homolog gene family, member A 
RHOV                  0.492   ras homolog gene family, member V 
RHOB                  0.492   ras homolog gene family, member B 
RHOF                  0.467   ras homolog gene family, member F 
RHOD                  0.454   ras homolog D 
RND2                  0.386   Rho family GTPase 2 
RND3                  0.372   ras homolog gene family, member E 
RHOH                  0.356   ras homolog gene family, member H 
RND1                  0.337   GTP-binding protein RHO6 
RHOBTB2               0.274   Rho-related BTB domain containing 2 isoform 3 [Homo...
RHOBTB2               0.274   Rho-related BTB domain containing 2 isoform 2 [Homo...
RHOBTB2               0.274   Rho-related BTB domain containing 2 isoform 1 [Homo...
RHOBTB1               0.274   Rho-related BTB domain containing 1 
RIT1                  0.182   Ras-like without CAAX 1 
RAP2B                 0.179   RAP2B, member of RAS oncogene family 
RAP2C                 0.171   RAP2C, member of RAS oncogene family 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press