Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: RHOC Sequence: fasta or formatted (193aa) NCBI GI: 28395033
Description:

ras homolog gene family, member C precursor

Referenced in:

Rho and Rac

Other entries for this name:
alt mRNA [193aa] ras homolog gene family, member C precursor
alt mRNA [193aa] ras homolog gene family, member C precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         12           2
 C cysteine            3.1          6           1
 D aspartate           7.3         14           1
 E glutamate           8.8         17           2
 F phenylalanine       3.6          7           1
 G glycine             5.7         11           1
 H histidine           1.0          2           1
 I isoleucine          6.2         12           2
 K lysine              7.8         15           2
 L leucine             7.8         15           2
 M methionine          2.6          5           1
 N asparagine          3.1          6           1
 P proline             5.7         11           1
 Q glutamine           3.1          6           1
 R arginine            7.8         15           3
 S serine              4.1          8           1
 T threonine           4.1          8           1
 V valine              8.3         16           1
 W tryptophan          1.0          2           1
 Y tyrosine            2.6          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ras homolog gene family, member C precursor 
RHOC                  1.000   ras homolog gene family, member C precursor 
RHOC                  1.000   ras homolog gene family, member C precursor 
RHOA                  0.932   ras homolog gene family, member A 
RHOB                  0.841   ras homolog gene family, member B 
RAC1                  0.522   ras-related C3 botulinum toxin substrate 1 isoform Ra...
RHOG                  0.511   ras homolog gene family, member G 
RAC2                  0.500   ras-related C3 botulinum toxin substrate 2 
RAC3                  0.497   ras-related C3 botulinum toxin substrate 3 (rho famil...
CDC42                 0.497   cell division cycle 42 isoform 1 
CDC42                 0.497   cell division cycle 42 isoform 1 
CDC42                 0.489   cell division cycle 42 isoform 2 
RAC1                  0.489   ras-related C3 botulinum toxin substrate 1 isoform Ra...
RHOQ                  0.478   ras-like protein TC10 
RHOD                  0.470   ras homolog D 
RND3                  0.465   ras homolog gene family, member E 
RND2                  0.462   Rho family GTPase 2 
RHOF                  0.451   ras homolog gene family, member F 
RHOJ                  0.451   ras homolog gene family, member J 
RHOU                  0.432   ras homolog gene family, member U 
RND1                  0.378   GTP-binding protein RHO6 
RHOV                  0.370   ras homolog gene family, member V 
RHOH                  0.351   ras homolog gene family, member H 
RHOBTB2               0.230   Rho-related BTB domain containing 2 isoform 3 [Homo...
RHOBTB2               0.230   Rho-related BTB domain containing 2 isoform 2 [Homo...
RHOBTB2               0.230   Rho-related BTB domain containing 2 isoform 1 [Homo...
RHOBTB1               0.224   Rho-related BTB domain containing 1 
RAB30                 0.181   RAB30, member RAS oncogene family 
HRAS                  0.178   v-Ha-ras Harvey rat sarcoma viral oncogene homolog ...
HRAS                  0.178   v-Ha-ras Harvey rat sarcoma viral oncogene homolog is...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press