Guide to the Human Genome
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Name: CPA4 Sequence: fasta or formatted (421aa) NCBI GI: 61743916
Description:

carboxypeptidase A4 preproprotein

Referenced in:

Carboxypeptidases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         33           2
 C cysteine            1.0          4           1
 D aspartate           5.7         24           2
 E glutamate           5.5         23           2
 F phenylalanine       4.8         20           2
 G glycine             6.7         28           1
 H histidine           2.4         10           1
 I isoleucine          5.9         25           2
 K lysine              5.0         21           2
 L leucine             8.1         34           2
 M methionine          1.7          7           1
 N asparagine          6.4         27           2
 P proline             4.5         19           1
 Q glutamine           3.8         16           1
 R arginine            5.2         22           2
 S serine              8.8         37           2
 T threonine           4.3         18           2
 V valine              6.2         26           2
 W tryptophan          2.1          9           1
 Y tyrosine            4.3         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   carboxypeptidase A4 preproprotein 
CPA2                  0.624   carboxypeptidase A2 (pancreatic) precursor 
CPA1                  0.556   carboxypeptidase A1 precursor 
CPA5                  0.508   carboxypeptidase A5 isoform 1 
CPA5                  0.508   carboxypeptidase A5 isoform 1 
CPA5                  0.375   carboxypeptidase A5 isoform 2 
CPB1                  0.368   pancreatic carboxypeptidase B1 preproprotein 
CPA6                  0.340   carboxypeptidase A6 isoform 1 precursor 
CPA3                  0.329   carboxypeptidase A3 precursor 
CPB2                  0.279   plasma carboxypeptidase B2 isoform a preproprotein ...
CPO                   0.273   carboxypeptidase O 
CPB2                  0.182   plasma carboxypeptidase B2 isoform b 
CPA6                  0.099   carboxypeptidase A6 isoform 2 
CPD                   0.059   carboxypeptidase D precursor 
CPZ                   0.042   carboxypeptidase Z isoform 3 
CPZ                   0.042   carboxypeptidase Z isoform 2 precursor 
CPZ                   0.042   carboxypeptidase Z isoform 1 
AEBP1                 0.041   adipocyte enhancer binding protein 1 precursor [Homo...
CPXM1                 0.040   carboxypeptidase X, member 1 precursor 
CPN1                  0.038   carboxypeptidase N, polypeptide 1 precursor 
CPE                   0.029   carboxypeptidase E preproprotein 
CPM                   0.024   carboxypeptidase M precursor 
CPM                   0.024   carboxypeptidase M precursor 
CPM                   0.024   carboxypeptidase M precursor 
CPXM2                 0.023   carboxypeptidase X (M14 family), member 2 
SI                    0.008   sucrase-isomaltase 
AGTPBP1               0.008   ATP/GTP binding protein 1 
CENPE                 0.007   centromere protein E 
P4HB                  0.007   prolyl 4-hydroxylase, beta subunit precursor 
ALX3                  0.006   aristaless-like homeobox 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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