Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: CPA5 Sequence: fasta or formatted (436aa) NCBI GI: 188536051
Description:

carboxypeptidase A5 isoform 1

Referenced in:

Carboxypeptidases

Other entries for this name:
alt mRNA [436aa] carboxypeptidase A5 isoform 1
alt prot [403aa] carboxypeptidase A5 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         27           3
 C cysteine            0.5          2           1
 D aspartate           5.3         23           1
 E glutamate           5.3         23           2
 F phenylalanine       4.6         20           1
 G glycine             7.6         33           3
 H histidine           3.0         13           1
 I isoleucine          8.0         35           2
 K lysine              4.4         19           1
 L leucine             8.9         39           2
 M methionine          2.8         12           1
 N asparagine          4.4         19           1
 P proline             4.8         21           1
 Q glutamine           3.4         15           1
 R arginine            5.0         22           2
 S serine              8.9         39           2
 T threonine           5.7         25           2
 V valine              5.0         22           1
 W tryptophan          2.1          9           1
 Y tyrosine            4.1         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   carboxypeptidase A5 isoform 1 
CPA5                  1.000   carboxypeptidase A5 isoform 1 
CPA5                  0.788   carboxypeptidase A5 isoform 2 
CPA1                  0.590   carboxypeptidase A1 precursor 
CPA2                  0.521   carboxypeptidase A2 (pancreatic) precursor 
CPA4                  0.492   carboxypeptidase A4 preproprotein 
CPA6                  0.314   carboxypeptidase A6 isoform 1 precursor 
CPB1                  0.313   pancreatic carboxypeptidase B1 preproprotein 
CPA3                  0.305   carboxypeptidase A3 precursor 
CPB2                  0.277   plasma carboxypeptidase B2 isoform a preproprotein ...
CPO                   0.218   carboxypeptidase O 
CPB2                  0.191   plasma carboxypeptidase B2 isoform b 
CPA6                  0.082   carboxypeptidase A6 isoform 2 
CPD                   0.028   carboxypeptidase D precursor 
CPE                   0.022   carboxypeptidase E preproprotein 
CPM                   0.022   carboxypeptidase M precursor 
CPM                   0.022   carboxypeptidase M precursor 
CPM                   0.022   carboxypeptidase M precursor 
CPZ                   0.020   carboxypeptidase Z isoform 3 
CPZ                   0.020   carboxypeptidase Z isoform 2 precursor 
CPZ                   0.020   carboxypeptidase Z isoform 1 
AGBL4                 0.008   ATP/GTP binding protein-like 4 
OR9G4                 0.006   olfactory receptor, family 9, subfamily G, member 4 ...
MRPS2                 0.006   mitochondrial ribosomal protein S2 
TRPC4AP               0.005   TRPC4-associated protein isoform a 
ANKIB1                0.005   ankyrin repeat and IBR domain containing 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press