Guide to the Human Genome
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Name: CPA6 Sequence: fasta or formatted (193aa) NCBI GI: 188536069
Description:

carboxypeptidase A6 isoform 2

Referenced in:

Carboxypeptidases

Other entries for this name:
alt prot [437aa] carboxypeptidase A6 isoform 1 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         10           1
 C cysteine            3.1          6           1
 D aspartate           4.1          8           1
 E glutamate           3.1          6           1
 F phenylalanine       6.7         13           1
 G glycine             6.2         12           1
 H histidine           4.1          8           2
 I isoleucine          5.2         10           1
 K lysine              7.3         14           2
 L leucine             8.8         17           2
 M methionine          4.7          9           1
 N asparagine          4.7          9           1
 P proline             3.6          7           1
 Q glutamine           0.5          1           1
 R arginine            8.8         17           2
 S serine              6.7         13           2
 T threonine           4.7          9           1
 V valine              4.1          8           1
 W tryptophan          4.1          8           1
 Y tyrosine            4.1          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   carboxypeptidase A6 isoform 2 
CPA6                  0.682   carboxypeptidase A6 isoform 1 precursor 
CPB1                  0.316   pancreatic carboxypeptidase B1 preproprotein 
CPO                   0.308   carboxypeptidase O 
CPA3                  0.305   carboxypeptidase A3 precursor 
CPB2                  0.260   plasma carboxypeptidase B2 isoform a preproprotein ...
CPA2                  0.221   carboxypeptidase A2 (pancreatic) precursor 
CPA4                  0.211   carboxypeptidase A4 preproprotein 
CPA1                  0.198   carboxypeptidase A1 precursor 
CPA5                  0.181   carboxypeptidase A5 isoform 2 
CPA5                  0.181   carboxypeptidase A5 isoform 1 
CPA5                  0.181   carboxypeptidase A5 isoform 1 
CPB2                  0.150   plasma carboxypeptidase B2 isoform b 
CPM                   0.059   carboxypeptidase M precursor 
CPM                   0.059   carboxypeptidase M precursor 
CPM                   0.059   carboxypeptidase M precursor 
CPZ                   0.051   carboxypeptidase Z isoform 3 
CPZ                   0.051   carboxypeptidase Z isoform 2 precursor 
CPZ                   0.051   carboxypeptidase Z isoform 1 
CPXM1                 0.041   carboxypeptidase X, member 1 precursor 
CPD                   0.038   carboxypeptidase D precursor 
CPN1                  0.031   carboxypeptidase N, polypeptide 1 precursor 
CPE                   0.025   carboxypeptidase E preproprotein 
AGBL1                 0.018   ATP/GTP binding protein-like 1 
SERGEF                0.010   deafness locus associated putative guanine nucleotide...
ZNF142                0.008   zinc finger protein 142 
HABP2                 0.005   hyaluronan binding protein 2 preproprotein 
SRRT                  0.005   arsenate resistance protein 2 isoform e 
SRRT                  0.005   arsenate resistance protein 2 isoform d 
SRRT                  0.005   arsenate resistance protein 2 isoform c 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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