Guide to the Human Genome
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Name: CPA6 Sequence: fasta or formatted (437aa) NCBI GI: 188536067
Description:

carboxypeptidase A6 isoform 1 precursor

Referenced in:

Carboxypeptidases

Other entries for this name:
alt prot [193aa] carboxypeptidase A6 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         31           3
 C cysteine            2.5         11           1
 D aspartate           3.2         14           2
 E glutamate           4.8         21           3
 F phenylalanine       4.8         21           1
 G glycine             5.5         24           1
 H histidine           3.9         17           2
 I isoleucine          4.8         21           1
 K lysine              6.9         30           2
 L leucine             9.6         42           2
 M methionine          2.7         12           1
 N asparagine          4.3         19           2
 P proline             4.3         19           1
 Q glutamine           3.0         13           1
 R arginine            7.1         31           2
 S serine              7.3         32           2
 T threonine           4.1         18           2
 V valine              4.8         21           1
 W tryptophan          2.5         11           1
 Y tyrosine            6.6         29           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   carboxypeptidase A6 isoform 1 precursor 
CPB1                  0.381   pancreatic carboxypeptidase B1 preproprotein 
CPA3                  0.368   carboxypeptidase A3 precursor 
CPB2                  0.328   plasma carboxypeptidase B2 isoform a preproprotein ...
CPA2                  0.326   carboxypeptidase A2 (pancreatic) precursor 
CPA4                  0.318   carboxypeptidase A4 preproprotein 
CPO                   0.312   carboxypeptidase O 
CPA5                  0.303   carboxypeptidase A5 isoform 1 
CPA5                  0.303   carboxypeptidase A5 isoform 1 
CPA1                  0.301   carboxypeptidase A1 precursor 
CPA6                  0.300   carboxypeptidase A6 isoform 2 
CPB2                  0.225   plasma carboxypeptidase B2 isoform b 
CPA5                  0.202   carboxypeptidase A5 isoform 2 
CPM                   0.032   carboxypeptidase M precursor 
CPM                   0.032   carboxypeptidase M precursor 
CPM                   0.032   carboxypeptidase M precursor 
CPXM1                 0.028   carboxypeptidase X, member 1 precursor 
CPD                   0.027   carboxypeptidase D precursor 
CPN1                  0.024   carboxypeptidase N, polypeptide 1 precursor 
CPZ                   0.022   carboxypeptidase Z isoform 3 
CPZ                   0.022   carboxypeptidase Z isoform 2 precursor 
CPZ                   0.022   carboxypeptidase Z isoform 1 
CPE                   0.018   carboxypeptidase E preproprotein 
AEBP1                 0.013   adipocyte enhancer binding protein 1 precursor [Homo...
CPXM2                 0.009   carboxypeptidase X (M14 family), member 2 
AGBL1                 0.008   ATP/GTP binding protein-like 1 
JAKMIP2               0.007   Janus kinase and microtubule interacting protein 2 [...
LOC100132016          0.006   PREDICTED: hypothetical protein 
LOC100131203          0.006   PREDICTED: hypothetical protein 
LOC100131203          0.006   PREDICTED: similar to serine/threonine-protein kina...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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