Guide to the Human Genome
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Name: SLC5A5 Sequence: fasta or formatted (643aa) NCBI GI: 4507035
Description:

solute carrier family 5 (sodium iodide symporter), member 5

Referenced in:

Solute Carrier Families
Thyroid and Thyroid Hormone Receptor

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.8         63           2
 C cysteine            2.2         14           2
 D aspartate           3.4         22           2
 E glutamate           3.0         19           2
 F phenylalanine       4.2         27           2
 G glycine            10.1         65           3
 H histidine           0.3          2           1
 I isoleucine          3.7         24           2
 K lysine              2.0         13           2
 L leucine            15.4         99           3
 M methionine          3.0         19           1
 N asparagine          2.3         15           1
 P proline             5.3         34           2
 Q glutamine           3.1         20           2
 R arginine            4.5         29           2
 S serine              7.5         48           2
 T threonine           6.4         41           2
 V valine              8.6         55           3
 W tryptophan          1.9         12           2
 Y tyrosine            3.4         22           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 5 (sodium iodide symporter), me... 
SLC5A8                0.440   solute carrier family 5 (iodide transporter), membe...
SLC5A12               0.409   solute carrier family 5 (sodium/glucose cotransport...
SLC5A6                0.335   solute carrier family 5 (sodium-dependent vitamin tr...
SLC5A11               0.074   solute carrier family 5 (sodium/glucose cotransporte...
SLC5A2                0.071   solute carrier family 5 (sodium/glucose cotransporter...
SLC5A4                0.070   solute carrier family 5 (low affinity glucose cotran...
SLC5A1                0.067   solute carrier family 5 (sodium/glucose cotransporter...
SLC5A10               0.066   solute carrier family 5 (sodium/glucose cotransport...
SLC5A3                0.062   solute carrier family 5 (inositol transporters), me...
SLC5A10               0.061   solute carrier family 5 (sodium/glucose cotransport...
SLC5A9                0.060   solute carrier family 5 (sodium/glucose cotransport...
SLC5A9                0.053   solute carrier family 5 (sodium/glucose cotransport...
SLC5A7                0.042   solute carrier family 5 (choline transporter), membe...
TRIOBP                0.007   TRIO and F-actin binding protein isoform 6 
LOC730036             0.006   PREDICTED: hypothetical protein 
DGAT2                 0.005   diacylglycerol O-acyltransferase 2 
OR6C75                0.005   olfactory receptor, family 6, subfamily C, member 75...
SLC29A1               0.004   equilibrative nucleoside transporter 1 
SLC29A1               0.004   equilibrative nucleoside transporter 1 
SLC29A1               0.004   equilibrative nucleoside transporter 1 
SLC29A1               0.004   equilibrative nucleoside transporter 1 
SLC29A1               0.004   equilibrative nucleoside transporter 1 
OR6C3                 0.004   olfactory receptor, family 6, subfamily C, member 3 ...
CXXC4                 0.004   CXXC finger 4 
POLQ                  0.004   DNA polymerase theta 
GPR120                0.004   G protein-coupled receptor 120 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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