Guide to the Human Genome
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Name: SLC5A2 Sequence: fasta or formatted (672aa) NCBI GI: 4507033
Description:

solute carrier family 5 (sodium/glucose cotransporter), member 2

Referenced in:

Kidney
Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.8         66           5
 C cysteine            2.8         19           1
 D aspartate           2.7         18           1
 E glutamate           3.6         24           2
 F phenylalanine       5.2         35           2
 G glycine             9.5         64           2
 H histidine           1.5         10           1
 I isoleucine          4.9         33           1
 K lysine              1.5         10           1
 L leucine            13.4         90           3
 M methionine          3.6         24           2
 N asparagine          2.1         14           1
 P proline             5.4         36           3
 Q glutamine           2.8         19           2
 R arginine            4.9         33           2
 S serine              7.3         49           3
 T threonine           4.0         27           1
 V valine              9.2         62           3
 W tryptophan          2.2         15           2
 Y tyrosine            3.6         24           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 5 (sodium/glucose cotransporter... 
SLC5A1                0.608   solute carrier family 5 (sodium/glucose cotransporter...
SLC5A4                0.571   solute carrier family 5 (low affinity glucose cotran...
SLC5A9                0.544   solute carrier family 5 (sodium/glucose cotransport...
SLC5A9                0.535   solute carrier family 5 (sodium/glucose cotransport...
SLC5A11               0.489   solute carrier family 5 (sodium/glucose cotransporte...
SLC5A10               0.471   solute carrier family 5 (sodium/glucose cotransport...
SLC5A10               0.464   solute carrier family 5 (sodium/glucose cotransport...
SLC5A3                0.438   solute carrier family 5 (inositol transporters), me...
SLC5A5                0.067   solute carrier family 5 (sodium iodide symporter), me...
SLC5A12               0.062   solute carrier family 5 (sodium/glucose cotransport...
SLC5A6                0.056   solute carrier family 5 (sodium-dependent vitamin tr...
SLC5A8                0.053   solute carrier family 5 (iodide transporter), membe...
SLC5A7                0.052   solute carrier family 5 (choline transporter), membe...
SLC12A9               0.008   solute carrier family 12 (potassium/chloride transpo...
SLC6A13               0.006   solute carrier family 6 (neurotransmitter transporte...
OR6N2                 0.005   olfactory receptor, family 6, subfamily N, member 2 ...
LPAR1                 0.005   lysophosphatidic acid receptor 1 
LPAR1                 0.005   lysophosphatidic acid receptor 1 
SLC25A41              0.005   solute carrier family 25, member 41 
SLC6A11               0.005   solute carrier family 6 (neurotransmitter transporter...
LOC100292080          0.004   PREDICTED: hypothetical protein XP_002345493 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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