Guide to the Human Genome
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Name: GALNT9 Sequence: fasta or formatted (237aa) NCBI GI: 38327556
Description:

UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 isoform B

Referenced in:

Protein Glycosylation

Other entries for this name:
alt prot [603aa] UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosam...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         17           2
 C cysteine            3.4          8           1
 D aspartate           6.8         16           2
 E glutamate           4.6         11           1
 F phenylalanine       2.5          6           1
 G glycine             6.3         15           1
 H histidine           2.1          5           1
 I isoleucine          3.0          7           1
 K lysine              5.1         12           2
 L leucine             8.9         21           2
 M methionine          3.8          9           1
 N asparagine          4.6         11           2
 P proline             4.6         11           1
 Q glutamine           3.4          8           1
 R arginine            9.3         22           1
 S serine              6.8         16           2
 T threonine           3.8          9           1
 V valine              6.8         16           2
 W tryptophan          2.5          6           1
 Y tyrosine            4.6         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ace... 
GALNT9                1.000   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac...
WBSCR17               0.594   UDP-GalNAc:polypeptide N-acetylgalactosaminyltransfe...
GALNTL4               0.467   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac...
GALNT8                0.410   polypeptide N-acetylgalactosaminyltransferase 8 [Homo...
GALNT13               0.188   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac...
GALNT1                0.182   polypeptide N-acetylgalactosaminyltransferase 1 [Hom...
GALNT12               0.167   N-acetylgalactosaminyltransferase 12 
GALNT4                0.167   polypeptide N-acetylgalactosaminyltransferase 4 [Hom...
GALNT6                0.165   polypeptide N-acetylgalactosaminyltransferase 6 [Ho...
GALNT2                0.152   polypeptide N-acetylgalactosaminyltransferase 2 [Homo...
GALNT14               0.152   N-acetylgalactosaminyltransferase 14 
GALNTL1               0.140   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ace...
GALNT3                0.140   polypeptide N-acetylgalactosaminyltransferase 3 [Ho...
GALNT5                0.133   N-acetylgalactosaminyltransferase 5 
GALNTL2               0.133   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac...
GALNT11               0.129   N-acetylgalactosaminyltransferase 11 
GALNTL5               0.110   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ace...
GALNT7                0.101   polypeptide N-acetylgalactosaminyltransferase 7 [Ho...
GALNTL6               0.091   N-acetylgalactosaminyltransferase-like 6 
GALNT10               0.091   GalNAc transferase 10 isoform b 
GALNT10               0.091   GalNAc transferase 10 isoform a 
IFIH1                 0.006   interferon induced with helicase C domain 1 
MYO9A                 0.006   myosin IXA 
GNPTAB                0.006   N-acetylglucosamine-1-phosphate transferase 
CPEB4                 0.006   cytoplasmic polyadenylation element binding protein...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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