Guide to the Human Genome
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Name: GALNT4 Sequence: fasta or formatted (578aa) NCBI GI: 34452725
Description:

polypeptide N-acetylgalactosaminyltransferase 4

Referenced in:

Protein Glycosylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         34           2
 C cysteine            2.6         15           1
 D aspartate           5.2         30           2
 E glutamate           7.4         43           2
 F phenylalanine       4.7         27           2
 G glycine             6.4         37           2
 H histidine           2.8         16           1
 I isoleucine          5.4         31           2
 K lysine              5.0         29           2
 L leucine             9.7         56           3
 M methionine          1.6          9           1
 N asparagine          4.7         27           2
 P proline             5.0         29           2
 Q glutamine           3.1         18           2
 R arginine            7.8         45           2
 S serine              6.2         36           2
 T threonine           5.2         30           2
 V valine              5.0         29           2
 W tryptophan          2.6         15           1
 Y tyrosine            3.8         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   polypeptide N-acetylgalactosaminyltransferase 4 [Hom... 
GALNT12               0.515   N-acetylgalactosaminyltransferase 12 
GALNT6                0.387   polypeptide N-acetylgalactosaminyltransferase 6 [Ho...
GALNT3                0.377   polypeptide N-acetylgalactosaminyltransferase 3 [Ho...
GALNT13               0.346   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac...
GALNT1                0.340   polypeptide N-acetylgalactosaminyltransferase 1 [Hom...
GALNT10               0.309   GalNAc transferase 10 isoform a 
GALNTL2               0.309   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac...
GALNT11               0.294   N-acetylgalactosaminyltransferase 11 
GALNTL6               0.291   N-acetylgalactosaminyltransferase-like 6 
GALNT2                0.291   polypeptide N-acetylgalactosaminyltransferase 2 [Homo...
GALNT14               0.281   N-acetylgalactosaminyltransferase 14 
GALNT5                0.281   N-acetylgalactosaminyltransferase 5 
GALNTL1               0.280   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ace...
GALNT9                0.248   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac...
GALNT7                0.242   polypeptide N-acetylgalactosaminyltransferase 7 [Ho...
GALNTL5               0.240   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ace...
WBSCR17               0.229   UDP-GalNAc:polypeptide N-acetylgalactosaminyltransfe...
GALNT8                0.219   polypeptide N-acetylgalactosaminyltransferase 8 [Homo...
GALNTL4               0.211   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac...
GALNT10               0.092   GalNAc transferase 10 isoform b 
GALNT9                0.067   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ace...
UNC5B                 0.008   unc-5 homolog B 
LOC100294036          0.007   PREDICTED: similar to HLA class II histocompatibili...
SFRS17A               0.007   DNA segment on chromosome X and Y (unique) 155 expre...
UNC5C                 0.006   unc5C 
ALG5                  0.006   dolichyl-phosphate beta-glucosyltransferase isoform 1...
B4GALNT4              0.005   beta 1,4-N-acetylgalactosaminyltransferase-transfera...
DPM1                  0.005   dolichyl-phosphate mannosyltransferase 1 
CHSY3                 0.005   chondroitin sulfate synthase 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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