Guide to the Human Genome
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Name: GNPTAB Sequence: fasta or formatted (1256aa) NCBI GI: 38202211
Description:

N-acetylglucosamine-1-phosphate transferase

Referenced in:

Protein Glycosylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         57           1
 C cysteine            1.8         22           1
 D aspartate           5.9         74           2
 E glutamate           6.4         81           3
 F phenylalanine       4.9         61           2
 G glycine             4.9         61           4
 H histidine           3.2         40           1
 I isoleucine          5.6         70           2
 K lysine              7.4         93           3
 L leucine            10.1        127           2
 M methionine          2.1         27           1
 N asparagine          5.6         70           2
 P proline             5.1         64           2
 Q glutamine           4.9         61           2
 R arginine            4.5         56           3
 S serine              7.1         89           2
 T threonine           5.8         73           2
 V valine              6.1         76           3
 W tryptophan          1.3         16           1
 Y tyrosine            3.0         38           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   N-acetylglucosamine-1-phosphate transferase 
NOTCH2                0.012   notch 2 preproprotein 
NOTCH3                0.011   Notch homolog 3 
NOTCH4                0.010   notch4 preproprotein 
NOTCH1                0.010   notch1 preproprotein 
MYH9                  0.007   myosin, heavy polypeptide 9, non-muscle 
KRTAP5-6              0.007   keratin associated protein 5-6 
C10orf68              0.005   chromosome 10 open reading frame 68 
PAPPA                 0.005   pregnancy-associated plasma protein A preproprotein ...
KRTAP5-3              0.005   keratin associated protein 5-3 
DIP2B                 0.005   DIP2 disco-interacting protein 2 homolog B 
KRTAP17-1             0.005   keratin associated protein 17-1 
KRTAP5-2              0.005   keratin associated protein 5-2 
FHAD1                 0.005   forkhead-associated (FHA) phosphopeptide binding do...
HECTD1                0.004   HECT domain containing 1 
KRTAP5-5              0.004   keratin associated protein 5-5 
DIP2A                 0.004   disco-interacting protein 2A isoform g 
DIP2A                 0.004   disco-interacting protein 2A isoform a 
PEAR1                 0.004   platelet endothelial aggregation receptor 1 
PAPPA2                0.004   pappalysin 2 isoform 1 
DIP2A                 0.004   disco-interacting protein 2A isoform f 
DIP2A                 0.004   disco-interacting protein 2A isoform d 
DIP2A                 0.004   disco-interacting protein 2A isoform c 
DIP2A                 0.004   disco-interacting protein 2A isoform b 
DIP2C                 0.004   DIP2 disco-interacting protein 2 homolog C 
LCE1F                 0.004   late cornified envelope 1F 
KRTAP5-9              0.004   keratin associated protein 5-9 
LOR                   0.004   loricrin 
TLX1                  0.004   T-cell leukemia homeobox 1 
SOX4                  0.003   SRY (sex determining region Y)-box 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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