Guide to the Human Genome
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Name: KRTAP5-9 Sequence: fasta or formatted (169aa) NCBI GI: 123702038
Description:

keratin associated protein 5-9

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             1.2          2           1
 C cysteine           35.5         60           3
 D aspartate           0.6          1           1
 E glutamate           0.0          0           0
 F phenylalanine       0.0          0           0
 G glycine            16.0         27           2
 H histidine           0.0          0           0
 I isoleucine          0.6          1           1
 K lysine              5.3          9           1
 L leucine             0.0          0           0
 M methionine          0.6          1           1
 N asparagine          0.0          0           0
 P proline             5.9         10           1
 Q glutamine           4.1          7           1
 R arginine            2.4          4           1
 S serine             23.1         39           3
 T threonine           0.0          0           0
 V valine              3.0          5           1
 W tryptophan          0.0          0           0
 Y tyrosine            1.8          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 5-9 
KRTAP5-8              0.775   keratin associated protein 5-8 
KRTAP5-3              0.750   keratin associated protein 5-3 
KRTAP5-7              0.695   keratin associated protein 5-7 
KRTAP5-11             0.675   keratin associated protein 5-11 
KRTAP5-5              0.665   keratin associated protein 5-5 
KRTAP5-4              0.627   keratin associated protein 5-4 
KRTAP5-1              0.595   keratin associated protein 5-1 
KRTAP5-2              0.570   keratin associated protein 5-2 
KRTAP5-10             0.560   keratin associated protein 5-10 
KRTAP5-6              0.507   keratin associated protein 5-6 
KRTAP10-2             0.305   keratin associated protein 10-2 
KRTAP4-3              0.305   keratin associated protein 4-3 
KRTAP4-9              0.300   keratin associated protein 4-9 
KRTAP4-9              0.300   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP4-8              0.297   PREDICTED: keratin associated protein 4-8 isoform 3...
LOC100134267          0.297   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.290   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.290   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-9              0.287   PREDICTED: keratin associated protein 4-9 isoform 2...
KRTAP4-8              0.285   PREDICTED: keratin associated protein 4-8 isoform 2...
LOC100134267          0.285   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-12             0.285   keratin associated protein 4-12 
KRTAP4-5              0.285   keratin associated protein 4-5 
KRTAP4-8              0.285   PREDICTED: keratin associated protein 4-8 
KRTAP4-11             0.282   keratin associated protein 4-11 
KRTAP4-4              0.275   keratin associated protein 4.4 
KRTAP10-5             0.275   keratin associated protein 10-5 
KRTAP10-4             0.275   keratin associated protein 10-4 
KRTAP4-8              0.275   PREDICTED: keratin associated protein 4.8 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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