Guide to the Human Genome
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Search of human proteins with 21040357

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|21040357 hemochromatosis protein isoform 11 precursor [Homo
sapiens]
         (76 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|21040357 hemochromatosis protein isoform 11 precursor [Homo s...   145   7e-36
gi|21040355 hemochromatosis protein isoform 10 precursor [Homo s...    99   7e-22
gi|21040353 hemochromatosis protein isoform 9 precursor [Homo sa...    99   7e-22
gi|21040351 hemochromatosis protein isoform 8 precursor [Homo sa...    99   7e-22
gi|21040349 hemochromatosis protein isoform 7 precursor [Homo sa...    99   7e-22
gi|21040347 hemochromatosis protein isoform 6 precursor [Homo sa...    99   7e-22
gi|21040343 hemochromatosis protein isoform 4 precursor [Homo sa...    99   7e-22
gi|21040341 hemochromatosis protein isoform 3 precursor [Homo sa...    99   7e-22
gi|4504377 hemochromatosis protein isoform 1 precursor [Homo sap...    99   7e-22
gi|166295173 kin of IRRE like [Homo sapiens]                           33   0.038
gi|17986001 major histocompatibility complex, class I, B precurs...    32   0.084
gi|52630342 major histocompatibility complex, class I, C precurs...    30   0.32 
gi|14192943 multiple EGF-like-domains 10 [Homo sapiens]                30   0.32 
gi|32967311 ephrin receptor EphA2 [Homo sapiens]                       30   0.42 
gi|125987593 leukocyte immunoglobulin-like receptor, subfamily B...    30   0.42 
gi|125987591 leukocyte immunoglobulin-like receptor, subfamily B...    30   0.42 
gi|5803070 leukocyte immunoglobulin-like receptor, subfamily B, ...    30   0.42 
gi|4557535 solute carrier family 26, member 3 [Homo sapiens]           28   1.2  
gi|86793109 complement receptor 1 isoform S precursor [Homo sapi...    28   1.6  
gi|86793036 complement receptor 1 isoform F precursor [Homo sapi...    28   1.6  
gi|108773799 ganglioside-induced differentiation-associated prot...    28   1.6  
gi|108773797 ganglioside-induced differentiation-associated prot...    28   1.6  
gi|167857792 programmed cell death 1 precursor [Homo sapiens]          28   2.1  
gi|170014689 VPS10 domain receptor protein SORCS 2 [Homo sapiens]      28   2.1  
gi|10092665 sushi domain containing 2 [Homo sapiens]                   28   2.1  
gi|239753040 PREDICTED: hypothetical protein XP_002345331 [Homo ...    27   3.5  
gi|239747598 PREDICTED: hypothetical protein XP_002347782 [Homo ...    27   3.5  
gi|239741463 PREDICTED: hypothetical protein XP_002342210 [Homo ...    27   3.5  
gi|157419150 protein tyrosine phosphatase, receptor type, M isof...    27   3.5  
gi|157419152 protein tyrosine phosphatase, receptor type, M isof...    27   3.5  

>gi|21040357 hemochromatosis protein isoform 11 precursor [Homo
          sapiens]
          Length = 76

 Score =  145 bits (366), Expect = 7e-36
 Identities = 76/76 (100%), Positives = 76/76 (100%)

Query: 1  MGPRARPALLLLMLLQTAVLQGRLLQPSPSGTLVIGVISGIAVFVVILFIGILFIILRKR 60
          MGPRARPALLLLMLLQTAVLQGRLLQPSPSGTLVIGVISGIAVFVVILFIGILFIILRKR
Sbjct: 1  MGPRARPALLLLMLLQTAVLQGRLLQPSPSGTLVIGVISGIAVFVVILFIGILFIILRKR 60

Query: 61 QGSRGAMGHYVLAERE 76
          QGSRGAMGHYVLAERE
Sbjct: 61 QGSRGAMGHYVLAERE 76


>gi|21040355 hemochromatosis protein isoform 10 precursor [Homo
           sapiens]
          Length = 168

 Score = 99.0 bits (245), Expect = 7e-22
 Identities = 50/51 (98%), Positives = 51/51 (100%)

Query: 26  QPSPSGTLVIGVISGIAVFVVILFIGILFIILRKRQGSRGAMGHYVLAERE 76
           +PSPSGTLVIGVISGIAVFVVILFIGILFIILRKRQGSRGAMGHYVLAERE
Sbjct: 118 EPSPSGTLVIGVISGIAVFVVILFIGILFIILRKRQGSRGAMGHYVLAERE 168



 Score = 52.0 bits (123), Expect = 1e-07
 Identities = 26/27 (96%), Positives = 26/27 (96%)

Query: 1  MGPRARPALLLLMLLQTAVLQGRLLQP 27
          MGPRARPALLLLMLLQTAVLQGRLL P
Sbjct: 1  MGPRARPALLLLMLLQTAVLQGRLLLP 27


>gi|21040353 hemochromatosis protein isoform 9 precursor [Homo
           sapiens]
          Length = 325

 Score = 99.0 bits (245), Expect = 7e-22
 Identities = 50/51 (98%), Positives = 51/51 (100%)

Query: 26  QPSPSGTLVIGVISGIAVFVVILFIGILFIILRKRQGSRGAMGHYVLAERE 76
           +PSPSGTLVIGVISGIAVFVVILFIGILFIILRKRQGSRGAMGHYVLAERE
Sbjct: 275 EPSPSGTLVIGVISGIAVFVVILFIGILFIILRKRQGSRGAMGHYVLAERE 325



 Score = 50.1 bits (118), Expect = 4e-07
 Identities = 25/25 (100%), Positives = 25/25 (100%)

Query: 1  MGPRARPALLLLMLLQTAVLQGRLL 25
          MGPRARPALLLLMLLQTAVLQGRLL
Sbjct: 1  MGPRARPALLLLMLLQTAVLQGRLL 25


>gi|21040351 hemochromatosis protein isoform 8 precursor [Homo
           sapiens]
          Length = 246

 Score = 99.0 bits (245), Expect = 7e-22
 Identities = 50/51 (98%), Positives = 51/51 (100%)

Query: 26  QPSPSGTLVIGVISGIAVFVVILFIGILFIILRKRQGSRGAMGHYVLAERE 76
           +PSPSGTLVIGVISGIAVFVVILFIGILFIILRKRQGSRGAMGHYVLAERE
Sbjct: 196 EPSPSGTLVIGVISGIAVFVVILFIGILFIILRKRQGSRGAMGHYVLAERE 246



 Score = 52.0 bits (123), Expect = 1e-07
 Identities = 26/26 (100%), Positives = 26/26 (100%)

Query: 1  MGPRARPALLLLMLLQTAVLQGRLLQ 26
          MGPRARPALLLLMLLQTAVLQGRLLQ
Sbjct: 1  MGPRARPALLLLMLLQTAVLQGRLLQ 26


>gi|21040349 hemochromatosis protein isoform 7 precursor [Homo
           sapiens]
          Length = 260

 Score = 99.0 bits (245), Expect = 7e-22
 Identities = 50/51 (98%), Positives = 51/51 (100%)

Query: 26  QPSPSGTLVIGVISGIAVFVVILFIGILFIILRKRQGSRGAMGHYVLAERE 76
           +PSPSGTLVIGVISGIAVFVVILFIGILFIILRKRQGSRGAMGHYVLAERE
Sbjct: 210 EPSPSGTLVIGVISGIAVFVVILFIGILFIILRKRQGSRGAMGHYVLAERE 260



 Score = 52.0 bits (123), Expect = 1e-07
 Identities = 26/26 (100%), Positives = 26/26 (100%)

Query: 1  MGPRARPALLLLMLLQTAVLQGRLLQ 26
          MGPRARPALLLLMLLQTAVLQGRLLQ
Sbjct: 1  MGPRARPALLLLMLLQTAVLQGRLLQ 26


>gi|21040347 hemochromatosis protein isoform 6 precursor [Homo
           sapiens]
          Length = 334

 Score = 99.0 bits (245), Expect = 7e-22
 Identities = 50/51 (98%), Positives = 51/51 (100%)

Query: 26  QPSPSGTLVIGVISGIAVFVVILFIGILFIILRKRQGSRGAMGHYVLAERE 76
           +PSPSGTLVIGVISGIAVFVVILFIGILFIILRKRQGSRGAMGHYVLAERE
Sbjct: 284 EPSPSGTLVIGVISGIAVFVVILFIGILFIILRKRQGSRGAMGHYVLAERE 334



 Score = 51.6 bits (122), Expect = 1e-07
 Identities = 29/53 (54%), Positives = 37/53 (69%), Gaps = 3/53 (5%)

Query: 1  MGPRARPALLLLMLLQTAVLQGRLLQPSPSGTLVIGVIS---GIAVFVVILFI 50
          MGPRARPALLLLMLLQTAVLQGRLL+      L +G      G+++F  + ++
Sbjct: 1  MGPRARPALLLLMLLQTAVLQGRLLRSHSLHYLFMGASEQDLGLSLFEALGYV 53


>gi|21040343 hemochromatosis protein isoform 4 precursor [Homo
           sapiens]
          Length = 256

 Score = 99.0 bits (245), Expect = 7e-22
 Identities = 50/51 (98%), Positives = 51/51 (100%)

Query: 26  QPSPSGTLVIGVISGIAVFVVILFIGILFIILRKRQGSRGAMGHYVLAERE 76
           +PSPSGTLVIGVISGIAVFVVILFIGILFIILRKRQGSRGAMGHYVLAERE
Sbjct: 206 EPSPSGTLVIGVISGIAVFVVILFIGILFIILRKRQGSRGAMGHYVLAERE 256



 Score = 51.6 bits (122), Expect = 1e-07
 Identities = 29/53 (54%), Positives = 37/53 (69%), Gaps = 3/53 (5%)

Query: 1  MGPRARPALLLLMLLQTAVLQGRLLQPSPSGTLVIGVIS---GIAVFVVILFI 50
          MGPRARPALLLLMLLQTAVLQGRLL+      L +G      G+++F  + ++
Sbjct: 1  MGPRARPALLLLMLLQTAVLQGRLLRSHSLHYLFMGASEQDLGLSLFEALGYV 53


>gi|21040341 hemochromatosis protein isoform 3 precursor [Homo
           sapiens]
          Length = 242

 Score = 99.0 bits (245), Expect = 7e-22
 Identities = 50/51 (98%), Positives = 51/51 (100%)

Query: 26  QPSPSGTLVIGVISGIAVFVVILFIGILFIILRKRQGSRGAMGHYVLAERE 76
           +PSPSGTLVIGVISGIAVFVVILFIGILFIILRKRQGSRGAMGHYVLAERE
Sbjct: 192 EPSPSGTLVIGVISGIAVFVVILFIGILFIILRKRQGSRGAMGHYVLAERE 242



 Score = 51.6 bits (122), Expect = 1e-07
 Identities = 29/53 (54%), Positives = 37/53 (69%), Gaps = 3/53 (5%)

Query: 1  MGPRARPALLLLMLLQTAVLQGRLLQPSPSGTLVIGVIS---GIAVFVVILFI 50
          MGPRARPALLLLMLLQTAVLQGRLL+      L +G      G+++F  + ++
Sbjct: 1  MGPRARPALLLLMLLQTAVLQGRLLRSHSLHYLFMGASEQDLGLSLFEALGYV 53


>gi|4504377 hemochromatosis protein isoform 1 precursor [Homo
           sapiens]
          Length = 348

 Score = 99.0 bits (245), Expect = 7e-22
 Identities = 50/51 (98%), Positives = 51/51 (100%)

Query: 26  QPSPSGTLVIGVISGIAVFVVILFIGILFIILRKRQGSRGAMGHYVLAERE 76
           +PSPSGTLVIGVISGIAVFVVILFIGILFIILRKRQGSRGAMGHYVLAERE
Sbjct: 298 EPSPSGTLVIGVISGIAVFVVILFIGILFIILRKRQGSRGAMGHYVLAERE 348



 Score = 51.6 bits (122), Expect = 1e-07
 Identities = 29/53 (54%), Positives = 37/53 (69%), Gaps = 3/53 (5%)

Query: 1  MGPRARPALLLLMLLQTAVLQGRLLQPSPSGTLVIGVIS---GIAVFVVILFI 50
          MGPRARPALLLLMLLQTAVLQGRLL+      L +G      G+++F  + ++
Sbjct: 1  MGPRARPALLLLMLLQTAVLQGRLLRSHSLHYLFMGASEQDLGLSLFEALGYV 53


>gi|166295173 kin of IRRE like [Homo sapiens]
          Length = 757

 Score = 33.5 bits (75), Expect = 0.038
 Identities = 15/48 (31%), Positives = 29/48 (60%), Gaps = 1/48 (2%)

Query: 17  TAVLQGRLLQPSPSGTLVIGVISGIAVFVVILFIGILFIILRKRQGSR 64
           TA++Q    +  P G ++ G   G ++ ++  FI ++F + R+R+GSR
Sbjct: 482 TAIIQLEEREVLPVG-IIAGATIGASILLIFFFIALVFFLYRRRKGSR 528


>gi|17986001 major histocompatibility complex, class I, B precursor
           [Homo sapiens]
          Length = 362

 Score = 32.3 bits (72), Expect = 0.084
 Identities = 13/46 (28%), Positives = 29/46 (63%), Gaps = 1/46 (2%)

Query: 26  QPSPSGTL-VIGVISGIAVFVVILFIGILFIILRKRQGSRGAMGHY 70
           +PS   T+ ++G+++G+AV  V++   ++  ++ +R+ S G  G Y
Sbjct: 299 EPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGKGGSY 344


>gi|52630342 major histocompatibility complex, class I, C precursor
           [Homo sapiens]
          Length = 366

 Score = 30.4 bits (67), Expect = 0.32
 Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 1/44 (2%)

Query: 26  QPSPSGTL-VIGVISGIAVFVVILFIGILFIILRKRQGSRGAMG 68
           +PS   T+ ++G+++G+AV VV+  +G +   +  R+ S G  G
Sbjct: 299 EPSSQPTIPIMGIVAGLAVLVVLAVLGAVVTAMMCRRKSSGGKG 342


>gi|14192943 multiple EGF-like-domains 10 [Homo sapiens]
          Length = 1140

 Score = 30.4 bits (67), Expect = 0.32
 Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)

Query: 29  PSGTLVIGVISGIAVFV-VILFIGILFIILR-KRQGSRGAM 67
           P+ +  IG I+GI + V V+LF+  LFII R K++G   +M
Sbjct: 850 PADSYQIGAIAGIIILVLVVLFLLALFIIYRHKQKGKESSM 890


>gi|32967311 ephrin receptor EphA2 [Homo sapiens]
          Length = 976

 Score = 30.0 bits (66), Expect = 0.42
 Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 4/42 (9%)

Query: 25  LQPSPSGTLVIGVISGIAVFVVILFI--GILFIILRKRQGSR 64
           L P  SG L   VI G+AV VV+L +  G+ F I R+R+  R
Sbjct: 527 LSPEGSGNL--AVIGGVAVGVVLLLVLAGVGFFIHRRRKNQR 566


>gi|125987593 leukocyte immunoglobulin-like receptor, subfamily B,
           member 5 isoform 3 [Homo sapiens]
          Length = 491

 Score = 30.0 bits (66), Expect = 0.42
 Identities = 12/30 (40%), Positives = 22/30 (73%)

Query: 35  IGVISGIAVFVVILFIGILFIILRKRQGSR 64
           +GV++G++V  V+L   +LF++LR R  S+
Sbjct: 358 LGVVTGVSVAFVLLLFLLLFLLLRHRHQSK 387


>gi|125987591 leukocyte immunoglobulin-like receptor, subfamily B,
           member 5 isoform 1 [Homo sapiens]
          Length = 591

 Score = 30.0 bits (66), Expect = 0.42
 Identities = 12/30 (40%), Positives = 22/30 (73%)

Query: 35  IGVISGIAVFVVILFIGILFIILRKRQGSR 64
           +GV++G++V  V+L   +LF++LR R  S+
Sbjct: 458 LGVVTGVSVAFVLLLFLLLFLLLRHRHQSK 487


>gi|5803070 leukocyte immunoglobulin-like receptor, subfamily B,
           member 5 isoform 2 [Homo sapiens]
          Length = 590

 Score = 30.0 bits (66), Expect = 0.42
 Identities = 12/30 (40%), Positives = 22/30 (73%)

Query: 35  IGVISGIAVFVVILFIGILFIILRKRQGSR 64
           +GV++G++V  V+L   +LF++LR R  S+
Sbjct: 457 LGVVTGVSVAFVLLLFLLLFLLLRHRHQSK 486


>gi|4557535 solute carrier family 26, member 3 [Homo sapiens]
          Length = 764

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 16/53 (30%), Positives = 29/53 (54%)

Query: 17  TAVLQGRLLQPSPSGTLVIGVISGIAVFVVILFIGILFIILRKRQGSRGAMGH 69
           TA+ +  + + +   T + G+I  I V +V+L IG L   L+K   +  A+G+
Sbjct: 395 TALSRSAVQESTGGKTQIAGLIGAIIVLIVVLAIGFLLAPLQKSVLAALALGN 447


>gi|86793109 complement receptor 1 isoform S precursor [Homo sapiens]
          Length = 2489

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 12/31 (38%), Positives = 23/31 (74%), Gaps = 1/31 (3%)

Query: 33   LVIGVISGIAVFVVILFIGILFIILRKRQGS 63
            L++G +SG  +F ++L I + +IIL+ R+G+
Sbjct: 2423 LIVGTLSG-TIFFILLIIFLSWIILKHRKGN 2452


>gi|86793036 complement receptor 1 isoform F precursor [Homo sapiens]
          Length = 2039

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 12/31 (38%), Positives = 23/31 (74%), Gaps = 1/31 (3%)

Query: 33   LVIGVISGIAVFVVILFIGILFIILRKRQGS 63
            L++G +SG  +F ++L I + +IIL+ R+G+
Sbjct: 1973 LIVGTLSG-TIFFILLIIFLSWIILKHRKGN 2002


>gi|108773799 ganglioside-induced differentiation-associated protein
           1 isoform b [Homo sapiens]
          Length = 290

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 4/56 (7%)

Query: 9   LLLLMLLQTAVLQGRLLQPSPSGT-LVIGVISGIAVFVVILF---IGILFIILRKR 60
           +L+  +L TA    +   P   GT LV+G+++G+  F  +LF   +G + +  R R
Sbjct: 231 ILISAVLPTAFRVAKKRAPKVLGTTLVVGLLAGVGYFAFMLFRKRLGSMILAFRPR 286


>gi|108773797 ganglioside-induced differentiation-associated protein
           1 isoform a [Homo sapiens]
          Length = 358

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 4/56 (7%)

Query: 9   LLLLMLLQTAVLQGRLLQPSPSGT-LVIGVISGIAVFVVILF---IGILFIILRKR 60
           +L+  +L TA    +   P   GT LV+G+++G+  F  +LF   +G + +  R R
Sbjct: 299 ILISAVLPTAFRVAKKRAPKVLGTTLVVGLLAGVGYFAFMLFRKRLGSMILAFRPR 354


>gi|167857792 programmed cell death 1 precursor [Homo sapiens]
          Length = 288

 Score = 27.7 bits (60), Expect = 2.1
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)

Query: 27  PSPSG---TLVIGVISGIAVFVVILFIGILFIILRKRQGSRGA 66
           P P+G   TLV+GV+ G+   +V+L   +  I  R  +G+ GA
Sbjct: 160 PRPAGQFQTLVVGVVGGLLGSLVLLVWVLAVICSRAARGTIGA 202


>gi|170014689 VPS10 domain receptor protein SORCS 2 [Homo sapiens]
          Length = 1159

 Score = 27.7 bits (60), Expect = 2.1
 Identities = 14/29 (48%), Positives = 17/29 (58%)

Query: 3  PRARPALLLLMLLQTAVLQGRLLQPSPSG 31
          PR+RP LLLL+LL      GR  +P   G
Sbjct: 31 PRSRPLLLLLLLLGACGAAGRSPEPGRLG 59


>gi|10092665 sushi domain containing 2 [Homo sapiens]
          Length = 822

 Score = 27.7 bits (60), Expect = 2.1
 Identities = 12/43 (27%), Positives = 26/43 (60%), Gaps = 2/43 (4%)

Query: 26  QPSPSGTLVIGVISGIAVFVVILFIGILFIILRKRQGSRGAMG 68
           QP  S  +++G+I G     V+  + +++++LR+R+G+    G
Sbjct: 779 QPGRSYAVLLGIIFG--GLAVVAAVALVYVLLRRRKGNTHVWG 819


>gi|239753040 PREDICTED: hypothetical protein XP_002345331 [Homo
           sapiens]
          Length = 244

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 13/25 (52%), Positives = 19/25 (76%)

Query: 5   ARPALLLLMLLQTAVLQGRLLQPSP 29
           A+PAL+LL+L   A+L+ +LL P P
Sbjct: 81  AQPALVLLLLRLLALLKLKLLPPPP 105


>gi|239747598 PREDICTED: hypothetical protein XP_002347782 [Homo
           sapiens]
          Length = 244

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 13/25 (52%), Positives = 19/25 (76%)

Query: 5   ARPALLLLMLLQTAVLQGRLLQPSP 29
           A+PAL+LL+L   A+L+ +LL P P
Sbjct: 81  AQPALVLLLLRLLALLKLKLLPPPP 105


>gi|239741463 PREDICTED: hypothetical protein XP_002342210 [Homo
           sapiens]
          Length = 244

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 13/25 (52%), Positives = 19/25 (76%)

Query: 5   ARPALLLLMLLQTAVLQGRLLQPSP 29
           A+PAL+LL+L   A+L+ +LL P P
Sbjct: 81  AQPALVLLLLRLLALLKLKLLPPPP 105


>gi|157419150 protein tyrosine phosphatase, receptor type, M isoform
           2 precursor [Homo sapiens]
          Length = 1452

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 10/27 (37%), Positives = 22/27 (81%), Gaps = 1/27 (3%)

Query: 34  VIGVISGIAVFVVILFIGILFIILRKR 60
           + GVI+GI +FV+I F+G++ ++ +++
Sbjct: 743 IAGVIAGILLFVII-FLGVVLVMKKRK 768


>gi|157419152 protein tyrosine phosphatase, receptor type, M isoform
           1 precursor [Homo sapiens]
          Length = 1465

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 10/27 (37%), Positives = 22/27 (81%), Gaps = 1/27 (3%)

Query: 34  VIGVISGIAVFVVILFIGILFIILRKR 60
           + GVI+GI +FV+I F+G++ ++ +++
Sbjct: 743 IAGVIAGILLFVII-FLGVVLVMKKRK 768


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.332    0.149    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,620,215
Number of Sequences: 37866
Number of extensions: 87754
Number of successful extensions: 479
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 438
Number of HSP's gapped (non-prelim): 70
length of query: 76
length of database: 18,247,518
effective HSP length: 48
effective length of query: 28
effective length of database: 16,429,950
effective search space: 460038600
effective search space used: 460038600
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 55 (25.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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