PDCD1 7047

Name: PDCD1	Sequence: fasta or formatted (288aa)		NCBI GI: 167857792
Description: programmed cell death 1 precursor		Referenced in: BCL2 Pathways, Caspases, and Programmed Cell Death Butyrophilin Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.0 23 2 C cysteine 2.1 6 1 D aspartate 4.5 13 1 E glutamate 4.9 14 1 F phenylalanine 4.2 12 1 G glycine 7.3 21 2 H histidine 1.0 3 1 I isoleucine 2.1 6 1 K lysine 1.7 5 1 L leucine 8.0 23 2 M methionine 1.4 4 1 N asparagine 2.4 7 1 P proline 11.5 33 2 Q glutamine 4.9 14 1 R arginine 8.3 24 2 S serine 8.7 25 2 T threonine 5.9 17 1 V valine 8.7 25 2 W tryptophan 3.1 9 1 Y tyrosine 1.4 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 programmed cell death 1 precursor LOC100291786 0.033 PREDICTED: similar to hCG2043206 LOC440871 0.033 PREDICTED: similar to hCG2043206 LOC100291682 0.033 PREDICTED: similar to hCG1686089 LOC100290992 0.033 PREDICTED: hypothetical protein XP_002347049 LOC642424 0.031 PREDICTED: similar to hCG1742442 LOC642424 0.031 PREDICTED: similar to hCG1742442 LOC642424 0.031 PREDICTED: similar to hCG1742442 LOC100287723 0.031 PREDICTED: hypothetical protein XP_002342271 LOC652493 0.029 PREDICTED: similar to pre-B lymphocyte gene 1 [Homo... ROBO2 0.028 roundabout, axon guidance receptor, homolog 2 isofo... ROBO2 0.028 roundabout, axon guidance receptor, homolog 2 isofor... LOC439957 0.026 PREDICTED: similar to hCG1742442 LOC439957 0.026 PREDICTED: similar to hCG1742442 LOC650405 0.026 PREDICTED: similar to hCG2042707 LOC100130100 0.024 PREDICTED: similar to hCG26659 LOC100291464 0.024 PREDICTED: hypothetical protein XP_002346449 LOC100130100 0.024 PREDICTED: similar to hCG26659 PTPRD 0.023 protein tyrosine phosphatase, receptor type, D isofor... PTPRD 0.023 protein tyrosine phosphatase, receptor type, D isofo... PTPRD 0.023 protein tyrosine phosphatase, receptor type, D isofo... PTPRD 0.023 protein tyrosine phosphatase, receptor type, D isofo... LOC100291027 0.023 PREDICTED: hypothetical protein XP_002348323 VSTM2L 0.023 V-set and transmembrane domain containing 2 like [Ho... SIRPB2 0.019 signal-regulatory protein beta 2 isoform 2 SIRPB2 0.019 signal-regulatory protein beta 2 isoform 1 TTN 0.017 titin isoform N2-A MPZ 0.014 myelin protein zero HHLA2 0.014 HERV-H LTR-associating 2 PTPRD 0.014 protein tyrosine phosphatase, receptor type, D isof... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.