Guide to the Human Genome
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Name: TEKT2 Sequence: fasta or formatted (430aa) NCBI GI: 16507950
Description:

tektin 2

Referenced in:

Testes and Sperm

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         38           2
 C cysteine            2.1          9           1
 D aspartate           7.2         31           2
 E glutamate          10.2         44           2
 F phenylalanine       1.9          8           1
 G glycine             0.9          4           1
 H histidine           2.1          9           1
 I isoleucine          3.3         14           1
 K lysine              6.3         27           2
 L leucine            13.5         58           2
 M methionine          1.9          8           1
 N asparagine          4.4         19           2
 P proline             2.6         11           1
 Q glutamine           7.0         30           3
 R arginine            8.1         35           2
 S serine              4.9         21           1
 T threonine           7.9         34           2
 V valine              4.9         21           2
 W tryptophan          1.2          5           1
 Y tyrosine            0.9          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tektin 2 
TEKT1                 0.227   tektin 1 
TEKT3                 0.202   tektin 3 
TEKT4                 0.200   tektin 4 
TEKT5                 0.170   tektin 5 
MAFIP                 0.159   PREDICTED: MAFF interacting protein 
LOC727768             0.070   PREDICTED: similar to tektin 4 
MYH3                  0.051   myosin, heavy chain 3, skeletal muscle, embryonic [H...
CGNL1                 0.043   cingulin-like 1 
EEA1                  0.038   early endosome antigen 1, 162kD 
FAM184B               0.037   hypothetical protein LOC27146 
RUFY1                 0.037   RUN and FYVE domain-containing 1 isoform b 
RUFY1                 0.037   RUN and FYVE domain-containing 1 isoform b 
RUFY1                 0.037   RUN and FYVE domain-containing 1 isoform a 
MYH9                  0.035   myosin, heavy polypeptide 9, non-muscle 
C14orf145             0.035   hypothetical protein LOC145508 
NUMA1                 0.035   nuclear mitotic apparatus protein 1 
MYH10                 0.034   myosin, heavy polypeptide 10, non-muscle 
MYH7                  0.033   myosin, heavy chain 7, cardiac muscle, beta 
PLEC1                 0.033   plectin 1 isoform 11 
PLEC1                 0.033   plectin 1 isoform 10 
PLEC1                 0.033   plectin 1 isoform 8 
PLEC1                 0.033   plectin 1 isoform 7 
PLEC1                 0.033   plectin 1 isoform 6 
PLEC1                 0.033   plectin 1 isoform 3 
PLEC1                 0.033   plectin 1 isoform 2 
PLEC1                 0.033   plectin 1 isoform 1 
MYH6                  0.032   myosin heavy chain 6 
MYH11                 0.030   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.030   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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