Guide to the Human Genome
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Name: TEKT4 Sequence: fasta or formatted (435aa) NCBI GI: 21389613
Description:

tektin 4

Referenced in:

Testes and Sperm

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.7         42           2
 C cysteine            2.8         12           1
 D aspartate           5.3         23           1
 E glutamate          10.6         46           2
 F phenylalanine       2.1          9           1
 G glycine             1.4          6           1
 H histidine           4.1         18           3
 I isoleucine          3.0         13           1
 K lysine              3.9         17           1
 L leucine            12.0         52           3
 M methionine          2.3         10           1
 N asparagine          3.7         16           1
 P proline             2.3         10           2
 Q glutamine           7.6         33           2
 R arginine            9.7         42           2
 S serine              5.7         25           2
 T threonine           7.6         33           2
 V valine              3.2         14           1
 W tryptophan          0.7          3           1
 Y tyrosine            2.5         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tektin 4 
MAFIP                 0.821   PREDICTED: MAFF interacting protein 
LOC727768             0.603   PREDICTED: similar to tektin 4 
TEKT3                 0.314   tektin 3 
MAFIP                 0.312   PREDICTED: MAFF interacting protein 
TEKT1                 0.299   tektin 1 
TEKT5                 0.241   tektin 5 
LOC100132288          0.197   hypothetical protein LOC100132288 
TEKT2                 0.194   tektin 2 
LOC652794             0.191   PREDICTED: similar to tektin 4 
MYH9                  0.031   myosin, heavy polypeptide 9, non-muscle 
CEP250                0.030   centrosomal protein 2 
C14orf145             0.028   hypothetical protein LOC145508 
MYH13                 0.028   myosin, heavy polypeptide 13, skeletal muscle [Homo...
GS85                  0.026   PREDICTED: hypothetical protein LOC100128785 
GS85                  0.026   PREDICTED: hypothetical protein LOC100128785 
GS85                  0.026   PREDICTED: hypothetical protein LOC100128785 
MYH11                 0.025   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.025   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.025   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.025   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
CROCC                 0.024   ciliary rootlet coiled-coil 
GCC1                  0.023   Golgi coiled-coil protein 1 
GOLGA1                0.023   golgin 97 
MYH7B                 0.023   myosin, heavy polypeptide 7B, cardiac muscle, beta ...
PPFIA3                0.021   PTPRF interacting protein alpha 3 
SLMAP                 0.021   sarcolemma associated protein 
GOLGB1                0.020   golgi autoantigen, golgin subfamily b, macrogolgin ...
CCDC158               0.020   coiled-coil domain containing 158 
CLIP1                 0.019   restin isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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