Guide to the Human Genome
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Name: MAFIP Sequence: fasta or formatted (333aa) NCBI GI: 239752581
Description:

PREDICTED: MAFF interacting protein

Not currently referenced in the text

Other entries for this name:
alt prot {445aa} PREDICTED: MAFF interacting protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.4         38           2
 C cysteine            3.9         13           1
 D aspartate           3.6         12           1
 E glutamate           9.9         33           2
 F phenylalanine       1.5          5           1
 G glycine             3.9         13           2
 H histidine           4.8         16           2
 I isoleucine          1.8          6           1
 K lysine              3.0         10           2
 L leucine             9.3         31           3
 M methionine          1.5          5           1
 N asparagine          3.9         13           2
 P proline             6.6         22           2
 Q glutamine           8.7         29           2
 R arginine            5.7         19           2
 S serine              6.3         21           2
 T threonine           6.3         21           1
 V valine              4.2         14           2
 W tryptophan          1.8          6           1
 X unknown             0.3          1           1
 Y tyrosine            1.5          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: MAFF interacting protein 
LOC727768             0.589   PREDICTED: similar to tektin 4 
MAFIP                 0.498   PREDICTED: MAFF interacting protein 
LOC652794             0.480   PREDICTED: similar to tektin 4 
TEKT4                 0.395   tektin 4 
TEKT3                 0.074   tektin 3 
GS85                  0.060   PREDICTED: hypothetical protein LOC100128785 
GS85                  0.060   PREDICTED: hypothetical protein LOC100128785 
GS85                  0.060   PREDICTED: hypothetical protein LOC100128785 
TEKT1                 0.059   tektin 1 
TEKT5                 0.044   tektin 5 
KRT20                 0.023   keratin 20 
CCDC21                0.021   coiled-coil domain containing 21 
CDC42BPB              0.020   CDC42-binding protein kinase beta 
CROCC                 0.020   ciliary rootlet coiled-coil 
CDC42BPG              0.018   CDC42 binding protein kinase gamma (DMPK-like) [Hom...
ODF2                  0.018   outer dense fiber of sperm tails 2 isoform 2 
ODF2                  0.018   outer dense fiber of sperm tails 2 isoform 1 
MYH7B                 0.018   myosin, heavy polypeptide 7B, cardiac muscle, beta ...
KRT7                  0.017   keratin 7 
MYH9                  0.017   myosin, heavy polypeptide 9, non-muscle 
CCDC88C               0.017   DVL-binding protein DAPLE 
NUMA1                 0.015   nuclear mitotic apparatus protein 1 
TMCO5A                0.015   transmembrane and coiled-coil domains 5A 
KRT25                 0.015   keratin 25 
KRT35                 0.015   keratin 35 
CCDC64B               0.014   coiled-coil domain containing 64B 
KRT27                 0.012   keratin 27 
LAMA5                 0.012   laminin alpha 5 
FAM184B               0.012   hypothetical protein LOC27146 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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