Guide to the Human Genome
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Search of human proteins with 156616320

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|156616320 acyl-malonyl condensing enzyme 1-like 3 [Homo
sapiens]
         (338 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|156616320 acyl-malonyl condensing enzyme 1-like 3 [Homo sapiens]   685   0.0  
gi|16876447 acyl-malonyl condensing enzyme [Homo sapiens]             620   e-178
gi|22748975 acyl-malonyl condensing enzyme 1 [Homo sapiens]           619   e-178
gi|89044650 PREDICTED: acyl-malonyl condensing enzyme 1-like 1 [...   617   e-177
gi|169212904 PREDICTED: acyl-malonyl condensing enzyme 1-like 1 ...   602   e-172
gi|147907044 transmembrane protein 22 [Homo sapiens]                  166   4e-41
gi|148235965 transmembrane protein 22 [Homo sapiens]                  166   4e-41
gi|148224156 transmembrane protein 22 [Homo sapiens]                  166   4e-41
gi|122939153 nicotinamide nucleotide transhydrogenase [Homo sapi...    35   0.12 
gi|122939155 nicotinamide nucleotide transhydrogenase [Homo sapi...    35   0.12 
gi|197927233 transmembrane protein 20 isoform 1 [Homo sapiens]         32   0.62 
gi|23397492 transmembrane protein 20 isoform 2 [Homo sapiens]          32   0.62 
gi|94818790 rhomboid domain containing 2 isoform a [Homo sapiens]      32   0.62 
gi|46409370 olfactory receptor, family 10, subfamily W, member 1...    32   0.81 
gi|169169677 PREDICTED: hypothetical protein [Homo sapiens]            31   1.4  
gi|8923873 G protein-coupled receptor 77 [Homo sapiens]                30   2.4  
gi|134244285 Notch homolog 3 [Homo sapiens]                            30   2.4  
gi|31982899 seven in absentia homolog 2 [Homo sapiens]                 30   2.4  
gi|4507595 tumor necrosis factor ligand superfamily, member 11 i...    30   3.1  
gi|226437571 abhydrolase domain containing 14A [Homo sapiens]          30   3.1  
gi|32698676 lipoma HMGIC fusion partner-like 2 [Homo sapiens]          30   3.1  
gi|239744758 PREDICTED: hypothetical protein XP_002343261 [Homo ...    30   4.0  
gi|168229226 hypothetical protein LOC401399 [Homo sapiens]             30   4.0  
gi|239755446 PREDICTED: hypothetical protein [Homo sapiens]            29   5.2  
gi|239749927 PREDICTED: hypothetical protein [Homo sapiens]            29   5.2  
gi|239753060 PREDICTED: similar to hCG1739112 [Homo sapiens]           29   6.8  
gi|239747612 PREDICTED: hypothetical protein XP_002347909 [Homo ...    29   6.8  
gi|207444687 solute carrier family 41, member 2 [Homo sapiens]         29   6.8  
gi|194239684 single-minded homolog 2 short isoform [Homo sapiens]      28   8.9  

>gi|156616320 acyl-malonyl condensing enzyme 1-like 3 [Homo sapiens]
          Length = 338

 Score =  685 bits (1767), Expect = 0.0
 Identities = 338/338 (100%), Positives = 338/338 (100%)

Query: 1   MAGSHPYLNPPDSTHPSPPSAPPSLRWHQCCQPSDATNGLLVALLGGGLPAGFVGPLSHM 60
           MAGSHPYLNPPDSTHPSPPSAPPSLRWHQCCQPSDATNGLLVALLGGGLPAGFVGPLSHM
Sbjct: 1   MAGSHPYLNPPDSTHPSPPSAPPSLRWHQCCQPSDATNGLLVALLGGGLPAGFVGPLSHM 60

Query: 61  AYQASNLPSLELLICRCLFHLPIALLLKLRGDPLLGPPDIRGRAYFYALLNVLSIGCAYS 120
           AYQASNLPSLELLICRCLFHLPIALLLKLRGDPLLGPPDIRGRAYFYALLNVLSIGCAYS
Sbjct: 61  AYQASNLPSLELLICRCLFHLPIALLLKLRGDPLLGPPDIRGRAYFYALLNVLSIGCAYS 120

Query: 121 AVQVVPAGNAATVRKGSSTVCSAVLTLCLESQGLSGYDWCGLLGSILGLIIIVGPGLWTL 180
           AVQVVPAGNAATVRKGSSTVCSAVLTLCLESQGLSGYDWCGLLGSILGLIIIVGPGLWTL
Sbjct: 121 AVQVVPAGNAATVRKGSSTVCSAVLTLCLESQGLSGYDWCGLLGSILGLIIIVGPGLWTL 180

Query: 181 QEGITGVYTALGYGQAFVGGLALSLGLLVYRSLHFPSCLPTVAFLSGLVGLLGSVPGLFV 240
           QEGITGVYTALGYGQAFVGGLALSLGLLVYRSLHFPSCLPTVAFLSGLVGLLGSVPGLFV
Sbjct: 181 QEGITGVYTALGYGQAFVGGLALSLGLLVYRSLHFPSCLPTVAFLSGLVGLLGSVPGLFV 240

Query: 241 LQPPVLPSDLPSWSCVGAVGILALVSFTCVSYAVTKAHPALVCAVLHSEVVVALILQYYM 300
           LQPPVLPSDLPSWSCVGAVGILALVSFTCVSYAVTKAHPALVCAVLHSEVVVALILQYYM
Sbjct: 241 LQPPVLPSDLPSWSCVGAVGILALVSFTCVSYAVTKAHPALVCAVLHSEVVVALILQYYM 300

Query: 301 LHETVAPSDIVGAGVVLGSIAIITAWNLSCEREGKVEE 338
           LHETVAPSDIVGAGVVLGSIAIITAWNLSCEREGKVEE
Sbjct: 301 LHETVAPSDIVGAGVVLGSIAIITAWNLSCEREGKVEE 338


>gi|16876447 acyl-malonyl condensing enzyme [Homo sapiens]
          Length = 338

 Score =  620 bits (1598), Expect = e-178
 Identities = 313/338 (92%), Positives = 317/338 (93%)

Query: 1   MAGSHPYLNPPDSTHPSPPSAPPSLRWHQCCQPSDATNGLLVALLGGGLPAGFVGPLSHM 60
           MAGSHPY N PDSTHPSPPSAPPSLRWHQ CQPS ATNGLLVALLGGGLPAGFVGPLS M
Sbjct: 1   MAGSHPYFNLPDSTHPSPPSAPPSLRWHQRCQPSGATNGLLVALLGGGLPAGFVGPLSRM 60

Query: 61  AYQASNLPSLELLICRCLFHLPIALLLKLRGDPLLGPPDIRGRAYFYALLNVLSIGCAYS 120
           AYQ SNLPSLELLICRCLFHLPIALLLKLRGDPLLGPPDIRG A F ALLNVLSIGCAYS
Sbjct: 61  AYQGSNLPSLELLICRCLFHLPIALLLKLRGDPLLGPPDIRGWACFCALLNVLSIGCAYS 120

Query: 121 AVQVVPAGNAATVRKGSSTVCSAVLTLCLESQGLSGYDWCGLLGSILGLIIIVGPGLWTL 180
           AVQVVPAGNAATVRKGSSTVCSAVLTLCLESQGL GY+WCGLLGSILGLIII+GPGLWTL
Sbjct: 121 AVQVVPAGNAATVRKGSSTVCSAVLTLCLESQGLGGYEWCGLLGSILGLIIILGPGLWTL 180

Query: 181 QEGITGVYTALGYGQAFVGGLALSLGLLVYRSLHFPSCLPTVAFLSGLVGLLGSVPGLFV 240
           QEG TGVYT LGY QAF+GGLALSLGLLVYRSLHFPSCLPTVAFLSGLVGLLG VPGLFV
Sbjct: 181 QEGTTGVYTTLGYVQAFLGGLALSLGLLVYRSLHFPSCLPTVAFLSGLVGLLGCVPGLFV 240

Query: 241 LQPPVLPSDLPSWSCVGAVGILALVSFTCVSYAVTKAHPALVCAVLHSEVVVALILQYYM 300
           LQ PVLPSDL SWSCVGA GILALVSFTCV YAVTKAHPALVCAVLHSEVVVALILQYYM
Sbjct: 241 LQTPVLPSDLLSWSCVGAEGILALVSFTCVGYAVTKAHPALVCAVLHSEVVVALILQYYM 300

Query: 301 LHETVAPSDIVGAGVVLGSIAIITAWNLSCEREGKVEE 338
           LHETVA SDI+GAGVVLGSIAIITA NLSCER GKVEE
Sbjct: 301 LHETVALSDIMGAGVVLGSIAIITARNLSCERTGKVEE 338


>gi|22748975 acyl-malonyl condensing enzyme 1 [Homo sapiens]
          Length = 338

 Score =  619 bits (1597), Expect = e-178
 Identities = 312/338 (92%), Positives = 319/338 (94%)

Query: 1   MAGSHPYLNPPDSTHPSPPSAPPSLRWHQCCQPSDATNGLLVALLGGGLPAGFVGPLSHM 60
           MAGSHPY N PDSTHPSPPSAPPSLRW+Q CQPSDAT+GLLVALLGGGLPAGFVGPLS M
Sbjct: 1   MAGSHPYFNQPDSTHPSPPSAPPSLRWYQRCQPSDATSGLLVALLGGGLPAGFVGPLSRM 60

Query: 61  AYQASNLPSLELLICRCLFHLPIALLLKLRGDPLLGPPDIRGRAYFYALLNVLSIGCAYS 120
           AYQASNLPSLELLI RCLFHLPIALLLKLRGDPLLG PDIR RA+F ALLN+LSIGCAYS
Sbjct: 61  AYQASNLPSLELLIWRCLFHLPIALLLKLRGDPLLGTPDIRSRAFFCALLNILSIGCAYS 120

Query: 121 AVQVVPAGNAATVRKGSSTVCSAVLTLCLESQGLSGYDWCGLLGSILGLIIIVGPGLWTL 180
           AVQVVPAGNAATVRKGSSTVCSAVLTLCLESQGLSGYDWCGLLG ILGLIIIVGPGLWTL
Sbjct: 121 AVQVVPAGNAATVRKGSSTVCSAVLTLCLESQGLSGYDWCGLLGCILGLIIIVGPGLWTL 180

Query: 181 QEGITGVYTALGYGQAFVGGLALSLGLLVYRSLHFPSCLPTVAFLSGLVGLLGSVPGLFV 240
           QEG TGVYTALGY +AF+GGLALSL LLVYRSLHFP CLPTVAFLSGLVGLLGSVPGLFV
Sbjct: 181 QEGTTGVYTALGYVEAFLGGLALSLRLLVYRSLHFPPCLPTVAFLSGLVGLLGSVPGLFV 240

Query: 241 LQPPVLPSDLPSWSCVGAVGILALVSFTCVSYAVTKAHPALVCAVLHSEVVVALILQYYM 300
           LQ PVLPSDL SWSCVGAVGILALVSFTCV YAVTKAHPALVCAVLHSEVVVALILQYYM
Sbjct: 241 LQAPVLPSDLLSWSCVGAVGILALVSFTCVGYAVTKAHPALVCAVLHSEVVVALILQYYM 300

Query: 301 LHETVAPSDIVGAGVVLGSIAIITAWNLSCEREGKVEE 338
           LHETVAPSDIV AGVVLGSIAIITA NLSCER G+VEE
Sbjct: 301 LHETVAPSDIVAAGVVLGSIAIITAQNLSCERTGRVEE 338


>gi|89044650 PREDICTED: acyl-malonyl condensing enzyme 1-like 1
           [Homo sapiens]
          Length = 338

 Score =  617 bits (1591), Expect = e-177
 Identities = 309/338 (91%), Positives = 316/338 (93%)

Query: 1   MAGSHPYLNPPDSTHPSPPSAPPSLRWHQCCQPSDATNGLLVALLGGGLPAGFVGPLSHM 60
           MAGSHPY N PDSTHPSPPS PPSL WHQ CQPSDATNGLLVALLGGGLPAGFVGPLS M
Sbjct: 1   MAGSHPYFNLPDSTHPSPPSTPPSLHWHQRCQPSDATNGLLVALLGGGLPAGFVGPLSRM 60

Query: 61  AYQASNLPSLELLICRCLFHLPIALLLKLRGDPLLGPPDIRGRAYFYALLNVLSIGCAYS 120
           AYQASNLPSLEL+ICRCLFHLPIALLLKLRGDPLLGPPDIRGR  F ALLNVL+IGCAYS
Sbjct: 61  AYQASNLPSLELVICRCLFHLPIALLLKLRGDPLLGPPDIRGRTCFCALLNVLNIGCAYS 120

Query: 121 AVQVVPAGNAATVRKGSSTVCSAVLTLCLESQGLSGYDWCGLLGSILGLIIIVGPGLWTL 180
           AVQVVP GNAATVRK SSTVCSA+LTLCLESQ LSGYDWCGLLGSILGLIIIVGPGLWTL
Sbjct: 121 AVQVVPTGNAATVRKHSSTVCSAILTLCLESQVLSGYDWCGLLGSILGLIIIVGPGLWTL 180

Query: 181 QEGITGVYTALGYGQAFVGGLALSLGLLVYRSLHFPSCLPTVAFLSGLVGLLGSVPGLFV 240
           QEG TGVYT LGY QAF+GGLALSLGLLVYRSLHFPSCLPTVAFLSGLVGLLGSVPGLFV
Sbjct: 181 QEGTTGVYTGLGYVQAFLGGLALSLGLLVYRSLHFPSCLPTVAFLSGLVGLLGSVPGLFV 240

Query: 241 LQPPVLPSDLPSWSCVGAVGILALVSFTCVSYAVTKAHPALVCAVLHSEVVVALILQYYM 300
           LQ PVLPSDL SWSCVGAVGIL LVSFTCV YAVTKAHPALVCAVLHSEVV+ALILQY+M
Sbjct: 241 LQSPVLPSDLLSWSCVGAVGILTLVSFTCVGYAVTKAHPALVCAVLHSEVVMALILQYFM 300

Query: 301 LHETVAPSDIVGAGVVLGSIAIITAWNLSCEREGKVEE 338
           LHETVAPSDI+GAGVVLGSIAIITA NL CER GKVEE
Sbjct: 301 LHETVAPSDIMGAGVVLGSIAIITARNLICERTGKVEE 338


>gi|169212904 PREDICTED: acyl-malonyl condensing enzyme 1-like 1
           [Homo sapiens]
          Length = 338

 Score =  602 bits (1551), Expect = e-172
 Identities = 306/338 (90%), Positives = 311/338 (92%)

Query: 1   MAGSHPYLNPPDSTHPSPPSAPPSLRWHQCCQPSDATNGLLVALLGGGLPAGFVGPLSHM 60
           MAGSHPY N PDSTHPSPPS PPSL WHQ CQPSDATNGLLVAL+GGGLPAGFVGPLS M
Sbjct: 1   MAGSHPYFNLPDSTHPSPPSTPPSLHWHQRCQPSDATNGLLVALMGGGLPAGFVGPLSRM 60

Query: 61  AYQASNLPSLELLICRCLFHLPIALLLKLRGDPLLGPPDIRGRAYFYALLNVLSIGCAYS 120
           AYQASNLPSLELLICRCLFHLPIALLLKLRGDPLLGPPDIRGRA F ALLNVL+IGCAYS
Sbjct: 61  AYQASNLPSLELLICRCLFHLPIALLLKLRGDPLLGPPDIRGRACFCALLNVLNIGCAYS 120

Query: 121 AVQVVPAGNAATVRKGSSTVCSAVLTLCLESQGLSGYDWCGLLGSILGLIIIVGPGLWTL 180
           AVQVVP GNAATV K SSTVCSAVLTLCL+SQ LSGYDWCGLLGSILGLIIIVGP LWTL
Sbjct: 121 AVQVVPTGNAATVCKRSSTVCSAVLTLCLKSQVLSGYDWCGLLGSILGLIIIVGPELWTL 180

Query: 181 QEGITGVYTALGYGQAFVGGLALSLGLLVYRSLHFPSCLPTVAFLSGLVGLLGSVPGLFV 240
           QEG TGVYT LGY QAF+GGLALSLGLLVYRSLHFPSCLPTVAFLSGLVGLLGSVPGLFV
Sbjct: 181 QEGTTGVYTILGYVQAFLGGLALSLGLLVYRSLHFPSCLPTVAFLSGLVGLLGSVPGLFV 240

Query: 241 LQPPVLPSDLPSWSCVGAVGILALVSFTCVSYAVTKAHPALVCAVLHSEVVVALILQYYM 300
           LQ PVLPSDL SWSCVG VGIL LVSFTCV YAVTKAHPALVCAVLHSEVVVALILQY M
Sbjct: 241 LQTPVLPSDLLSWSCVGTVGILTLVSFTCVGYAVTKAHPALVCAVLHSEVVVALILQYNM 300

Query: 301 LHETVAPSDIVGAGVVLGSIAIITAWNLSCEREGKVEE 338
           LHETVAPSDI+GAGVVLGSIAIITA NL  ER  KVEE
Sbjct: 301 LHETVAPSDIMGAGVVLGSIAIITARNLIFERTEKVEE 338


>gi|147907044 transmembrane protein 22 [Homo sapiens]
          Length = 412

 Score =  166 bits (419), Expect = 4e-41
 Identities = 90/288 (31%), Positives = 156/288 (54%), Gaps = 1/288 (0%)

Query: 42  VALLGGGLPAGFVGPLSHMAYQASNLPSLELLICRCLFHLPIALLLKLRGDPLLGPPDIR 101
           + L G  L  G V  ++ +    S +PSLEL+  R +F +   L++    +   GP   R
Sbjct: 106 IVLFGSALAHGCVALITRLVSDRSKVPSLELIFIRSVFQVLSVLVVCYYQEAPFGPSGYR 165

Query: 102 GRAYFYALLNVLSIGCAYSAVQVVPAGNAATVRKGSSTVCSAVLTLCLESQGLSGYDWCG 161
            R +FY + NV+SI CAY++  +VP  N  T+ + ++TV SA+L   L  + ++  D   
Sbjct: 166 LRLFFYGVCNVISITCAYTSFSIVPPSNGTTMWRATTTVFSAILAFLLVDEKMAYVDMAT 225

Query: 162 LLGSILGLIIIVGPGLWTLQEGITGVYT-ALGYGQAFVGGLALSLGLLVYRSLHFPSCLP 220
           ++ SILG+ +++ P +      +   +  A GY    + GL  +L ++VYRS+     + 
Sbjct: 226 VVCSILGVCLVMIPNIVDEDNSLLNAWKEAFGYTMTVMAGLTTALSMIVYRSIKEKISMW 285

Query: 221 TVAFLSGLVGLLGSVPGLFVLQPPVLPSDLPSWSCVGAVGILALVSFTCVSYAVTKAHPA 280
           T  F  G  G +  +  +F+LQ P++P D  +WS + A+ + +  +F  V YA+ K HPA
Sbjct: 286 TALFTFGWTGTIWGISTMFILQEPIIPLDGETWSYLIAICVCSTAAFLGVYYALDKFHPA 345

Query: 281 LVCAVLHSEVVVALILQYYMLHETVAPSDIVGAGVVLGSIAIITAWNL 328
           LV  V H E+VVA++LQ  +LH   +  D+ G  +++ S+ ++  + L
Sbjct: 346 LVSTVQHLEIVVAMVLQLLVLHIFPSIYDVFGGVIIMISVFVLAGYKL 393


>gi|148235965 transmembrane protein 22 [Homo sapiens]
          Length = 412

 Score =  166 bits (419), Expect = 4e-41
 Identities = 90/288 (31%), Positives = 156/288 (54%), Gaps = 1/288 (0%)

Query: 42  VALLGGGLPAGFVGPLSHMAYQASNLPSLELLICRCLFHLPIALLLKLRGDPLLGPPDIR 101
           + L G  L  G V  ++ +    S +PSLEL+  R +F +   L++    +   GP   R
Sbjct: 106 IVLFGSALAHGCVALITRLVSDRSKVPSLELIFIRSVFQVLSVLVVCYYQEAPFGPSGYR 165

Query: 102 GRAYFYALLNVLSIGCAYSAVQVVPAGNAATVRKGSSTVCSAVLTLCLESQGLSGYDWCG 161
            R +FY + NV+SI CAY++  +VP  N  T+ + ++TV SA+L   L  + ++  D   
Sbjct: 166 LRLFFYGVCNVISITCAYTSFSIVPPSNGTTMWRATTTVFSAILAFLLVDEKMAYVDMAT 225

Query: 162 LLGSILGLIIIVGPGLWTLQEGITGVYT-ALGYGQAFVGGLALSLGLLVYRSLHFPSCLP 220
           ++ SILG+ +++ P +      +   +  A GY    + GL  +L ++VYRS+     + 
Sbjct: 226 VVCSILGVCLVMIPNIVDEDNSLLNAWKEAFGYTMTVMAGLTTALSMIVYRSIKEKISMW 285

Query: 221 TVAFLSGLVGLLGSVPGLFVLQPPVLPSDLPSWSCVGAVGILALVSFTCVSYAVTKAHPA 280
           T  F  G  G +  +  +F+LQ P++P D  +WS + A+ + +  +F  V YA+ K HPA
Sbjct: 286 TALFTFGWTGTIWGISTMFILQEPIIPLDGETWSYLIAICVCSTAAFLGVYYALDKFHPA 345

Query: 281 LVCAVLHSEVVVALILQYYMLHETVAPSDIVGAGVVLGSIAIITAWNL 328
           LV  V H E+VVA++LQ  +LH   +  D+ G  +++ S+ ++  + L
Sbjct: 346 LVSTVQHLEIVVAMVLQLLVLHIFPSIYDVFGGVIIMISVFVLAGYKL 393


>gi|148224156 transmembrane protein 22 [Homo sapiens]
          Length = 412

 Score =  166 bits (419), Expect = 4e-41
 Identities = 90/288 (31%), Positives = 156/288 (54%), Gaps = 1/288 (0%)

Query: 42  VALLGGGLPAGFVGPLSHMAYQASNLPSLELLICRCLFHLPIALLLKLRGDPLLGPPDIR 101
           + L G  L  G V  ++ +    S +PSLEL+  R +F +   L++    +   GP   R
Sbjct: 106 IVLFGSALAHGCVALITRLVSDRSKVPSLELIFIRSVFQVLSVLVVCYYQEAPFGPSGYR 165

Query: 102 GRAYFYALLNVLSIGCAYSAVQVVPAGNAATVRKGSSTVCSAVLTLCLESQGLSGYDWCG 161
            R +FY + NV+SI CAY++  +VP  N  T+ + ++TV SA+L   L  + ++  D   
Sbjct: 166 LRLFFYGVCNVISITCAYTSFSIVPPSNGTTMWRATTTVFSAILAFLLVDEKMAYVDMAT 225

Query: 162 LLGSILGLIIIVGPGLWTLQEGITGVYT-ALGYGQAFVGGLALSLGLLVYRSLHFPSCLP 220
           ++ SILG+ +++ P +      +   +  A GY    + GL  +L ++VYRS+     + 
Sbjct: 226 VVCSILGVCLVMIPNIVDEDNSLLNAWKEAFGYTMTVMAGLTTALSMIVYRSIKEKISMW 285

Query: 221 TVAFLSGLVGLLGSVPGLFVLQPPVLPSDLPSWSCVGAVGILALVSFTCVSYAVTKAHPA 280
           T  F  G  G +  +  +F+LQ P++P D  +WS + A+ + +  +F  V YA+ K HPA
Sbjct: 286 TALFTFGWTGTIWGISTMFILQEPIIPLDGETWSYLIAICVCSTAAFLGVYYALDKFHPA 345

Query: 281 LVCAVLHSEVVVALILQYYMLHETVAPSDIVGAGVVLGSIAIITAWNL 328
           LV  V H E+VVA++LQ  +LH   +  D+ G  +++ S+ ++  + L
Sbjct: 346 LVSTVQHLEIVVAMVLQLLVLHIFPSIYDVFGGVIIMISVFVLAGYKL 393


>gi|122939153 nicotinamide nucleotide transhydrogenase [Homo
           sapiens]
          Length = 1086

 Score = 34.7 bits (78), Expect = 0.12
 Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 13/142 (9%)

Query: 191 LGYGQAFVGGLALSLGLLVYRSLH-----FPSCLPTVAFLSGLVGLLG-SVPGLFVLQPP 244
           + Y   ++GG+  S  L+ Y  L       P  LP    L+   GLL  SV G+      
Sbjct: 741 VAYLGTYIGGVTFSGSLIAYGKLQGLLKSAPLLLPGRHLLNA--GLLAASVGGIIPFM-- 796

Query: 245 VLPSDLPSWSCVGAVGILALVSFTCVSYAVTKAHPALVCAVLHSEVVVALILQYYMLHE- 303
           V PS     +C+G+V  L+ V    ++ A+  A   +V  VL+S    AL  + ++L+  
Sbjct: 797 VDPSFTTGITCLGSVSALSAVMGVTLTAAIGGADMPVVITVLNSYSGWALCAEGFLLNNN 856

Query: 304 --TVAPSDIVGAGVVLGSIAII 323
             T+  + I  +G +L  I  +
Sbjct: 857 LLTIVGALIGSSGAILSYIMCV 878


>gi|122939155 nicotinamide nucleotide transhydrogenase [Homo
           sapiens]
          Length = 1086

 Score = 34.7 bits (78), Expect = 0.12
 Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 13/142 (9%)

Query: 191 LGYGQAFVGGLALSLGLLVYRSLH-----FPSCLPTVAFLSGLVGLLG-SVPGLFVLQPP 244
           + Y   ++GG+  S  L+ Y  L       P  LP    L+   GLL  SV G+      
Sbjct: 741 VAYLGTYIGGVTFSGSLIAYGKLQGLLKSAPLLLPGRHLLNA--GLLAASVGGIIPFM-- 796

Query: 245 VLPSDLPSWSCVGAVGILALVSFTCVSYAVTKAHPALVCAVLHSEVVVALILQYYMLHE- 303
           V PS     +C+G+V  L+ V    ++ A+  A   +V  VL+S    AL  + ++L+  
Sbjct: 797 VDPSFTTGITCLGSVSALSAVMGVTLTAAIGGADMPVVITVLNSYSGWALCAEGFLLNNN 856

Query: 304 --TVAPSDIVGAGVVLGSIAII 323
             T+  + I  +G +L  I  +
Sbjct: 857 LLTIVGALIGSSGAILSYIMCV 878


>gi|197927233 transmembrane protein 20 isoform 1 [Homo sapiens]
          Length = 365

 Score = 32.3 bits (72), Expect = 0.62
 Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 8/117 (6%)

Query: 63  QASNLPSLELLICRCLFHLPIAL-LLKLRGDPLLGPPDIRGRAYFYALLNVL---SIGCA 118
           +  ++ ++E+   RC+F + + +  L  R    +GP   +G+  F  L  VL   ++   
Sbjct: 91  KVQDVHAVEISAFRCVFQMLVVIPCLIYRKTGFIGP---KGQRIFLILRGVLGSTAMMLI 147

Query: 119 YSAVQVVPAGNAATVRKGSSTVCSAVLTLCLESQGLSGYDWCGLLGSILGLIIIVGP 175
           Y A Q +   +A  +   S    S    +CL+ +  S +D    + +I G+I+IV P
Sbjct: 148 YYAYQTMSLADATVITFSSPVFTSIFAWICLKEK-YSPWDALFTVFTITGVILIVRP 203


>gi|23397492 transmembrane protein 20 isoform 2 [Homo sapiens]
          Length = 364

 Score = 32.3 bits (72), Expect = 0.62
 Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 8/117 (6%)

Query: 63  QASNLPSLELLICRCLFHLPIAL-LLKLRGDPLLGPPDIRGRAYFYALLNVL---SIGCA 118
           +  ++ ++E+   RC+F + + +  L  R    +GP   +G+  F  L  VL   ++   
Sbjct: 90  KVQDVHAVEISAFRCVFQMLVVIPCLIYRKTGFIGP---KGQRIFLILRGVLGSTAMMLI 146

Query: 119 YSAVQVVPAGNAATVRKGSSTVCSAVLTLCLESQGLSGYDWCGLLGSILGLIIIVGP 175
           Y A Q +   +A  +   S    S    +CL+ +  S +D    + +I G+I+IV P
Sbjct: 147 YYAYQTMSLADATVITFSSPVFTSIFAWICLKEK-YSPWDALFTVFTITGVILIVRP 202


>gi|94818790 rhomboid domain containing 2 isoform a [Homo sapiens]
          Length = 364

 Score = 32.3 bits (72), Expect = 0.62
 Identities = 15/32 (46%), Positives = 21/32 (65%)

Query: 219 LPTVAFLSGLVGLLGSVPGLFVLQPPVLPSDL 250
           +P+  F + L+ LL S P LF+LQ P+ PS L
Sbjct: 17  VPSATFFTALLSLLVSGPRLFLLQQPLAPSGL 48


>gi|46409370 olfactory receptor, family 10, subfamily W, member 1
           [Homo sapiens]
          Length = 305

 Score = 32.0 bits (71), Expect = 0.81
 Identities = 34/131 (25%), Positives = 59/131 (45%), Gaps = 14/131 (10%)

Query: 194 GQAFVGGLALSLGLLVYRSLHFPSCLPTVAFLSGLVGLLGSVPGL-----FVLQPPVLPS 248
           G + V GL ++  +L+  S+H  +CL T  +       LGS+ G+      V+ P +L +
Sbjct: 21  GVSLVYGLIITGNILIVVSIHTETCLCTSMYY-----FLGSLSGIEICYTAVVVPHILAN 75

Query: 249 DLPSWSCVGAVGILALVSFTCVSYAVTKAHPALVCAVLHSE-VVVALILQYYMLHETVAP 307
            L S   +  +G    ++F     A+  A   L+ A+ +   V +   LQY +L      
Sbjct: 76  TLQSEKTITLLGCATQMAF---FIALGSADCFLLAAMAYDRYVAICHPLQYPLLMTLTLC 132

Query: 308 SDIVGAGVVLG 318
             +V A V+ G
Sbjct: 133 VHLVVASVISG 143


>gi|169169677 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 167

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 16/42 (38%), Positives = 19/42 (45%)

Query: 212 SLHFPSCLPTVAFLSGLVGLLGSVPGLFVLQPPVLPSDLPSW 253
           S H PS LP VA L G +G+            P+LP   P W
Sbjct: 18  SAHLPSALPAVATLGGRLGVRVPFAPRPPASDPLLPPAFPGW 59


>gi|8923873 G protein-coupled receptor 77 [Homo sapiens]
          Length = 337

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 40/154 (25%), Positives = 61/154 (39%), Gaps = 38/154 (24%)

Query: 78  LFHLPIALLLKLRGDPLLGPPDIRGRAYFYALLNVLSIGC-AYSAVQVVPAGNAATVRKG 136
           L HL +A LL     P+L  P  RG  + Y      ++GC A  ++ ++           
Sbjct: 73  LLHLAVADLLCCLSLPILAVPIARGGHWPYG-----AVGCRALPSIILL----------- 116

Query: 137 SSTVCSAVLTLCLESQGLSGYDWCGLLGSILGLIIIVGPGLWTLQEGITGVYTALGYGQA 196
             T+ ++VL L   S  L                + +GP  W+  +   GV  A   G A
Sbjct: 117 --TMYASVLLLAALSADL--------------CFLALGPAWWSTVQRACGVQVAC--GAA 158

Query: 197 FVGGLALSLGLLVYRSL---HFPSCLPTVAFLSG 227
           +   L L++   +YR L   HFP+ L  V    G
Sbjct: 159 WTLALLLTVPSAIYRRLHQEHFPARLQCVVDYGG 192


>gi|134244285 Notch homolog 3 [Homo sapiens]
          Length = 2321

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 5    HPYLNP-PDSTHPSPPSAPPSLRWHQCCQPSDATNGLLVALLGGGLPA 51
            HPYL P P+S       +PPSL       PS AT    +A   G LPA
Sbjct: 2242 HPYLTPSPESPEHWASPSPPSLSDWSESTPSPATATGAMATTTGALPA 2289


>gi|31982899 seven in absentia homolog 2 [Homo sapiens]
          Length = 324

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 15/58 (25%), Positives = 25/58 (43%)

Query: 10 PPDSTHPSPPSAPPSLRWHQCCQPSDATNGLLVALLGGGLPAGFVGPLSHMAYQASNL 67
          PP   H   P+APP+        P  +      A++ G    G  GP+S   ++ ++L
Sbjct: 20 PPQPQHTPSPAAPPAAATISAAGPGSSAVPAAAAVISGPGGGGGAGPVSPQHHELTSL 77


>gi|4507595 tumor necrosis factor ligand superfamily, member 11
          isoform 1 [Homo sapiens]
          Length = 317

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 3/49 (6%)

Query: 1  MAGSHPYLNPPDSTHPSPPSAPPSLRWHQCCQPSDATNGLLVALLGGGL 49
          + GS      P + H  P  APP    HQ   P  A+  + VALLG GL
Sbjct: 12 LRGSEEMGGGPGAPHEGPLHAPPPPAPHQ---PPAASRSMFVALLGLGL 57


>gi|226437571 abhydrolase domain containing 14A [Homo sapiens]
          Length = 271

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 7/74 (9%)

Query: 162 LLGSILGLIIIVGPGLWTLQEGITGVYTALGYGQAFVGGLALSLGLLVYRSLHFP----S 217
           ++G++ G    +G     +  G T V T++   Q  + GL+L L LL+Y  L  P    S
Sbjct: 1   MVGALCGCWFRLGGARPLIPLGPTVVQTSMSRSQVALLGLSLLLMLLLYVGLPGPPEQTS 60

Query: 218 CL---PTVAFLSGL 228
           CL   P V  L+GL
Sbjct: 61  CLWGDPNVTVLAGL 74


>gi|32698676 lipoma HMGIC fusion partner-like 2 [Homo sapiens]
          Length = 228

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 5/47 (10%)

Query: 143 AVLTLCLES-QGLSGYDWCGLLGSILGLIIIVG----PGLWTLQEGI 184
           +V T+C++S    S ++ CGLL  I GL +I+G    P  W  Q+ I
Sbjct: 118 SVFTMCVQSIMKKSIFNVCGLLQGIAGLFLILGLILYPAGWGCQKAI 164


>gi|239744758 PREDICTED: hypothetical protein XP_002343261 [Homo
           sapiens]
          Length = 324

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 12/29 (41%), Positives = 14/29 (48%)

Query: 5   HPYLNPPDSTHPSPPSAPPSLRWHQCCQP 33
           H  L PP +  P  P+A P   WH C  P
Sbjct: 212 HTRLPPPAAGRPGSPTAAPLQGWHPCGVP 240


>gi|168229226 hypothetical protein LOC401399 [Homo sapiens]
          Length = 899

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 7/93 (7%)

Query: 223 AFLSGLVGLLGSVPGLFVLQPPVLPSDLPSWSCVGAVGILALVSFTCVSYAVTKAHPALV 282
           A + G+  L G V  L +L   +LP     W C      LAL+    +S   T+A P   
Sbjct: 365 AHVYGVGALFGLVALLALLALALLP-----WRCPPGAPCLALLDLLLLSAGTTRAFPLFY 419

Query: 283 CAVLHSEVVVALILQYYMLHETVAPSDIVGAGV 315
            A  H + + A  L + +L +   P    G G+
Sbjct: 420 DAYGHRDRLPA--LAWLLLQDLPLPCLAAGLGL 450


>gi|239755446 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 394

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 29/97 (29%), Positives = 39/97 (40%), Gaps = 25/97 (25%)

Query: 5   HPYLNPP---DSTHPS-PPSAPPSLRWHQCCQPSDATNGLLVALLGGGLPAGFVGPLSHM 60
           HP+++PP    STHPS  PS  PS+  H    PS                   + P  H 
Sbjct: 133 HPFIHPPTIHSSTHPSIHPSIHPSI--HPPTHPS-------------------IHPSIHP 171

Query: 61  AYQASNLPSLELLICRCLFHLPIALLLKLRGDPLLGP 97
               S  PS+ L I + + H  I  L+ L   P + P
Sbjct: 172 FIHPSIHPSIHLSIHQSIIHPLIYPLIYLSIHPSIHP 208


>gi|239749927 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 295

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 29/97 (29%), Positives = 39/97 (40%), Gaps = 25/97 (25%)

Query: 5   HPYLNPP---DSTHPS-PPSAPPSLRWHQCCQPSDATNGLLVALLGGGLPAGFVGPLSHM 60
           HP+++PP    STHPS  PS  PS+  H    PS                   + P  H 
Sbjct: 33  HPFIHPPTIHSSTHPSIHPSIHPSI--HPPTHPS-------------------IHPSIHP 71

Query: 61  AYQASNLPSLELLICRCLFHLPIALLLKLRGDPLLGP 97
               S  PS+ L I + + H  I  L+ L   P + P
Sbjct: 72  FIHPSIHPSIHLSIHQSIIHPLIYPLIYLSIHPSIHP 108


>gi|239753060 PREDICTED: similar to hCG1739112 [Homo sapiens]
          Length = 211

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 20/56 (35%), Positives = 23/56 (41%), Gaps = 14/56 (25%)

Query: 17 SPPSAPPSLRWHQCCQPSDATNGLLVALLGGGLPAGFVGPLSHMAY--QASNLPSL 70
          SP  APP+ +W    QPS              LPA F GP     +  QAS  P L
Sbjct: 18 SPGPAPPASQWPLSAQPSSC------------LPAAFPGPAFDFRWPLQASTRPGL 61


>gi|239747612 PREDICTED: hypothetical protein XP_002347909 [Homo
          sapiens]
          Length = 211

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 20/56 (35%), Positives = 23/56 (41%), Gaps = 14/56 (25%)

Query: 17 SPPSAPPSLRWHQCCQPSDATNGLLVALLGGGLPAGFVGPLSHMAY--QASNLPSL 70
          SP  APP+ +W    QPS              LPA F GP     +  QAS  P L
Sbjct: 18 SPGPAPPASQWPLSAQPSSC------------LPAAFPGPAFDFRWPLQASTRPGL 61


>gi|207444687 solute carrier family 41, member 2 [Homo sapiens]
          Length = 573

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 2/69 (2%)

Query: 163 LGSILGLIIIVGPGLWTLQEGITGVYTALGYGQAFVGGLALSLGLLVYRSLHFPSCLPTV 222
           + S+L  II+VG  + + + GI     A     +F  G  ++L +L + S    SCL T 
Sbjct: 288 IASLLQGIIMVGVIVGSKKTGINPDNVATPIAASF--GDLITLAILAWISQGLYSCLETY 345

Query: 223 AFLSGLVGL 231
            ++S LVG+
Sbjct: 346 YYISPLVGV 354


>gi|194239684 single-minded homolog 2 short isoform [Homo sapiens]
          Length = 570

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 4/50 (8%)

Query: 7   YLNP--PDSTHPS--PPSAPPSLRWHQCCQPSDATNGLLVALLGGGLPAG 52
           Y NP  P S+ P+  PP  P +   H      +  +GLLV  +GG   AG
Sbjct: 493 YANPLVPSSSSPAKNPPEPPANTARHSLVPSYEGGSGLLVGKVGGLRTAG 542


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.141    0.446 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,021,749
Number of Sequences: 37866
Number of extensions: 732252
Number of successful extensions: 2905
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 2881
Number of HSP's gapped (non-prelim): 31
length of query: 338
length of database: 18,247,518
effective HSP length: 103
effective length of query: 235
effective length of database: 14,347,320
effective search space: 3371620200
effective search space used: 3371620200
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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