Guide to the Human Genome
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Name: AMAC1L3 Sequence: fasta or formatted (338aa) NCBI GI: 156616320
Description:

acyl-malonyl condensing enzyme 1-like 3

Referenced in:

Fatty Acid Synthesis

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.2         31           2
 C cysteine            3.8         13           2
 D aspartate           2.1          7           1
 E glutamate           2.7          9           2
 F phenylalanine       2.4          8           1
 G glycine            10.9         37           3
 H histidine           2.7          9           1
 I isoleucine          4.4         15           3
 K lysine              1.2          4           1
 L leucine            17.2         58           3
 M methionine          0.9          3           1
 N asparagine          1.8          6           1
 P proline             8.0         27           2
 Q glutamine           2.7          9           1
 R arginine            2.4          8           1
 S serine              9.2         31           2
 T threonine           3.8         13           1
 V valine              9.8         33           3
 W tryptophan          1.5          5           1
 Y tyrosine            3.6         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   acyl-malonyl condensing enzyme 1-like 3 
AMAC1L2               0.902   acyl-malonyl condensing enzyme 
AMAC1                 0.900   acyl-malonyl condensing enzyme 1 
AMAC1L1               0.897   PREDICTED: acyl-malonyl condensing enzyme 1-like 1 [...
AMAC1L1               0.874   PREDICTED: acyl-malonyl condensing enzyme 1-like 1 ...
TMEM22                0.214   transmembrane protein 22 
TMEM22                0.214   transmembrane protein 22 
TMEM22                0.214   transmembrane protein 22 
NNT                   0.015   nicotinamide nucleotide transhydrogenase 
NNT                   0.015   nicotinamide nucleotide transhydrogenase 
TMEM20                0.011   transmembrane protein 20 isoform 1 
TMEM20                0.011   transmembrane protein 20 isoform 2 
RHBDD2                0.011   rhomboid domain containing 2 isoform a 
OR10W1                0.011   olfactory receptor, family 10, subfamily W, member 1...
LOC100133889          0.009   PREDICTED: hypothetical protein 
GPR77                 0.008   G protein-coupled receptor 77 
NOTCH3                0.008   Notch homolog 3 
SIAH2                 0.008   seven in absentia homolog 2 
TNFSF11               0.008   tumor necrosis factor ligand superfamily, member 11 i...
ABHD14A               0.008   abhydrolase domain containing 14A 
LHFPL2                0.008   lipoma HMGIC fusion partner-like 2 
LOC100288239          0.008   PREDICTED: hypothetical protein XP_002343261 
LOC401399             0.008   hypothetical protein LOC401399 
LOC100133981          0.006   PREDICTED: hypothetical protein 
LOC100133439          0.006   PREDICTED: hypothetical protein 
LOC100292804          0.006   PREDICTED: similar to hCG1739112 
LOC100289693          0.006   PREDICTED: hypothetical protein XP_002347909 
SLC41A2               0.006   solute carrier family 41, member 2 
SIM2                  0.005   single-minded homolog 2 short isoform 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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