Guide to the Human Genome
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Name: C2 Sequence: fasta or formatted (752aa) NCBI GI: 14550407
Description:

complement component 2 isoform 1 preproprotein

Referenced in:

Complement

Other entries for this name:
alt prot [620aa] complement component 2 isoform 2 preproprotein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         43           2
 C cysteine            3.2         24           1
 D aspartate           5.1         38           2
 E glutamate           5.2         39           1
 F phenylalanine       4.3         32           2
 G glycine             8.2         62           2
 H histidine           2.5         19           1
 I isoleucine          4.3         32           2
 K lysine              4.8         36           2
 L leucine             9.7         73           3
 M methionine          2.7         20           2
 N asparagine          5.7         43           2
 P proline             5.6         42           3
 Q glutamine           4.0         30           1
 R arginine            5.5         41           2
 S serine              8.5         64           2
 T threonine           4.9         37           1
 V valine              6.4         48           2
 W tryptophan          1.7         13           1
 Y tyrosine            2.1         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   complement component 2 isoform 1 preproprotein [Homo... 
C2                    0.794   complement component 2 isoform 2 preproprotein [Hom...
CFB                   0.321   complement factor B preproprotein 
SVEP1                 0.050   polydom 
CSMD1                 0.050   CUB and Sushi multiple domains 1 
CSMD3                 0.046   CUB and Sushi multiple domains 3 isoform 2 
CSMD3                 0.046   CUB and Sushi multiple domains 3 isoform 3 
CSMD3                 0.046   CUB and Sushi multiple domains 3 isoform 1 
TMPRSS4               0.038   transmembrane protease, serine 4 isoform 3 
TMPRSS4               0.038   transmembrane protease, serine 4 isoform 1 
CSMD2                 0.037   CUB and Sushi multiple domains 2 
TESSP1                0.037   testis-specific serine protease 1 
OVCH2                 0.037   ovochymase 2 
SELE                  0.036   selectin E precursor 
TMPRSS6               0.035   transmembrane protease, serine 6 
SELP                  0.034   selectin P precursor 
PRSS27                0.033   marapsin 
PROC                  0.033   protein C 
TMPRSS12              0.033   transmembrane protease, serine 12 
C1S                   0.032   complement component 1, s subcomponent precursor [Hom...
C1S                   0.032   complement component 1, s subcomponent precursor [Ho...
PRSS8                 0.032   prostasin preproprotein 
LOC100293486          0.032   PREDICTED: similar to hCG2041452 
LOC100291379          0.032   PREDICTED: hypothetical protein XP_002346556 
LOC100288960          0.032   PREDICTED: hypothetical protein XP_002342392 
ESSPL                 0.032   epidermis-specific serine protease-like protein [Ho...
C4BPB                 0.031   complement component 4 binding protein, beta chain i...
C4BPB                 0.031   complement component 4 binding protein, beta chain i...
C4BPB                 0.031   complement component 4 binding protein, beta chain is...
TMPRSS11B             0.031   transmembrane protease, serine 11B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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