CSMD1 6286

Name: CSMD1	Sequence: fasta or formatted (3565aa)		NCBI GI: 157502199
Description: CUB and Sushi multiple domains 1		Referenced in: Gene Structure Additional Interaction Domain Families
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.0 180 3 C cysteine 4.0 142 1 D aspartate 4.8 172 3 E glutamate 4.5 159 2 F phenylalanine 5.4 193 2 G glycine 10.1 360 3 H histidine 2.8 101 1 I isoleucine 5.1 183 3 K lysine 3.2 115 2 L leucine 7.9 281 5 M methionine 0.8 30 1 N asparagine 5.0 178 2 P proline 6.4 228 3 Q glutamine 4.0 142 2 R arginine 3.7 133 2 S serine 9.6 341 3 T threonine 6.8 244 3 V valine 5.5 196 2 W tryptophan 1.6 58 1 Y tyrosine 3.6 129 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 CUB and Sushi multiple domains 1 CSMD3 0.611 CUB and Sushi multiple domains 3 isoform 2 CSMD3 0.611 CUB and Sushi multiple domains 3 isoform 1 CSMD2 0.577 CUB and Sushi multiple domains 2 CSMD3 0.551 CUB and Sushi multiple domains 3 isoform 3 SVEP1 0.066 polydom CR1 0.045 complement receptor 1 isoform F precursor CR1 0.044 complement receptor 1 isoform S precursor CR2 0.039 complement component (3d/Epstein Barr virus) recepto... CR2 0.039 complement component (3d/Epstein Barr virus) recepto... SEZ6L 0.031 seizure related 6 homolog (mouse)-like precursor [Ho... SELP 0.030 selectin P precursor SEZ6 0.030 seizure related 6 homolog isoform 2 SEZ6 0.030 seizure related 6 homolog isoform 1 BMP1 0.027 bone morphogenetic protein 1 isoform 3 precursor [Hom... SEZ6L2 0.027 seizure related 6 homolog (mouse)-like 2 isoform 3 ... SEZ6L2 0.027 seizure related 6 homolog (mouse)-like 2 isoform 2 ... SEZ6L2 0.027 seizure related 6 homolog (mouse)-like 2 isoform 1 [H... TLL2 0.025 tolloid-like 2 TLL1 0.024 tolloid-like 1 SEZ6L2 0.023 seizure related 6 homolog (mouse)-like 2 isoform 4 ... CR1L 0.022 complement component (3b/4b) receptor 1-like CFH 0.022 complement factor H isoform a precursor SELE 0.021 selectin E precursor BMP1 0.018 bone morphogenetic protein 1 isoform 2 precursor [Hom... BMP1 0.017 bone morphogenetic protein 1 isoform 1 precursor [Hom... C4BPA 0.017 complement component 4 binding protein, alpha chain p... CFH 0.014 complement factor H isoform b precursor C4BPB 0.013 complement component 4 binding protein, beta chain i... C4BPB 0.013 complement component 4 binding protein, beta chain i... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.