CSMD3 26738

Name: CSMD3	Sequence: fasta or formatted (3707aa)		NCBI GI: 38045888
Description: CUB and Sushi multiple domains 3 isoform 1		Referenced in: Gene Structure Additional Interaction Domain Families
Other entries for this name: alt prot [3538aa] CUB and Sushi multiple domains 3 isoform 3 alt prot [3667aa] CUB and Sushi multiple domains 3 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.9 146 2 C cysteine 3.9 145 1 D aspartate 4.5 166 2 E glutamate 4.7 174 3 F phenylalanine 5.2 193 2 G glycine 10.1 374 3 H histidine 2.6 97 2 I isoleucine 6.0 221 2 K lysine 3.0 111 2 L leucine 6.8 253 3 M methionine 1.2 46 1 N asparagine 5.4 202 3 P proline 6.9 255 4 Q glutamine 3.8 140 2 R arginine 4.0 147 3 S serine 9.8 364 3 T threonine 6.9 255 3 V valine 5.7 212 3 W tryptophan 1.5 57 2 Y tyrosine 4.0 149 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 CUB and Sushi multiple domains 3 isoform 1 CSMD3 0.984 CUB and Sushi multiple domains 3 isoform 2 CSMD3 0.819 CUB and Sushi multiple domains 3 isoform 3 CSMD1 0.587 CUB and Sushi multiple domains 1 CSMD2 0.471 CUB and Sushi multiple domains 2 SVEP1 0.064 polydom CR1 0.049 complement receptor 1 isoform S precursor CR1 0.048 complement receptor 1 isoform F precursor CR2 0.042 complement component (3d/Epstein Barr virus) recepto... CR2 0.041 complement component (3d/Epstein Barr virus) recepto... SELP 0.030 selectin P precursor SEZ6L 0.027 seizure related 6 homolog (mouse)-like precursor [Ho... SEZ6 0.027 seizure related 6 homolog isoform 2 SEZ6 0.027 seizure related 6 homolog isoform 1 SEZ6L2 0.026 seizure related 6 homolog (mouse)-like 2 isoform 3 ... SEZ6L2 0.026 seizure related 6 homolog (mouse)-like 2 isoform 2 ... SEZ6L2 0.026 seizure related 6 homolog (mouse)-like 2 isoform 1 [H... TLL1 0.025 tolloid-like 1 TLL2 0.024 tolloid-like 2 SELE 0.023 selectin E precursor CR1L 0.023 complement component (3b/4b) receptor 1-like BMP1 0.022 bone morphogenetic protein 1 isoform 3 precursor [Hom... SEZ6L2 0.022 seizure related 6 homolog (mouse)-like 2 isoform 4 ... CFH 0.022 complement factor H isoform a precursor C4BPA 0.019 complement component 4 binding protein, alpha chain p... BMP1 0.016 bone morphogenetic protein 1 isoform 1 precursor [Hom... BMP1 0.015 bone morphogenetic protein 1 isoform 2 precursor [Hom... CFH 0.014 complement factor H isoform b precursor MASP2 0.013 mannan-binding lectin serine protease 2 isoform 1 pr... MFRP 0.013 membrane frizzled-related protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.