Guide to the Human Genome
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Name: SLC26A6 Sequence: fasta or formatted (758aa) NCBI GI: 94721255
Description:

solute carrier family 26, member 6 isoform 2

Referenced in:

Kidney
Solute Carrier Families

Other entries for this name:
alt prot [759aa] solute carrier family 26, member 6 isoform 1
alt prot [740aa] solute carrier family 26, member 6 isoform 3
alt prot [738aa] solute carrier family 26, member 6 isoform 4
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.6         65           3
 C cysteine            1.1          8           1
 D aspartate           4.5         34           1
 E glutamate           3.7         28           2
 F phenylalanine       4.5         34           2
 G glycine             6.7         51           2
 H histidine           2.5         19           1
 I isoleucine          4.4         33           3
 K lysine              4.5         34           3
 L leucine            14.1        107           3
 M methionine          2.4         18           2
 N asparagine          2.5         19           2
 P proline             4.5         34           2
 Q glutamine           4.7         36           3
 R arginine            4.4         33           3
 S serine              8.4         64           2
 T threonine           4.4         33           2
 V valine             10.7         81           3
 W tryptophan          1.1          8           1
 Y tyrosine            2.5         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 26, member 6 isoform 2 
SLC26A6               0.997   solute carrier family 26, member 6 isoform 1 
SLC26A6               0.970   solute carrier family 26, member 6 isoform 4 
SLC26A6               0.952   solute carrier family 26, member 6 isoform 3 
SLC26A5               0.367   prestin isoform a 
SLC26A4               0.359   pendrin 
SLC26A5               0.354   prestin isoform b 
SLC26A3               0.329   solute carrier family 26, member 3 
SLC26A9               0.329   solute carrier family 26, member 9 isoform a 
SLC26A9               0.329   solute carrier family 26, member 9 isoform b 
SLC26A5               0.293   prestin isoform c 
SLC26A2               0.267   solute carrier family 26 member 2 
SLC26A1               0.263   solute carrier family 26, member 1 isoform a 
SLC26A1               0.263   solute carrier family 26, member 1 isoform a 
SLC26A8               0.238   solute carrier family 26, member 8 isoform a 
SLC26A7               0.194   solute carrier family 26, member 7 isoform a 
SLC26A7               0.194   solute carrier family 26, member 7 isoform b 
SLC26A10              0.175   solute carrier family 26, member 10 
SLC26A9               0.161   solute carrier family 26, member 9 isoform c 
SLC26A5               0.154   prestin isoform d 
SLC26A8               0.143   solute carrier family 26, member 8 isoform b 
SLC26A11              0.139   solute carrier family 26, member 11 
SLC26A1               0.062   solute carrier family 26, member 1 isoform b 
CIR1                  0.006   CBF1 interacting corepressor 
ATP8A1                0.006   ATPase, aminophospholipid transporter (APLT), class...
ATP8A1                0.006   ATPase, aminophospholipid transporter (APLT), class ...
NBEA                  0.006   neurobeachin 
ATP9B                 0.005   ATPase, class II, type 9B 
NEFH                  0.004   neurofilament, heavy polypeptide 200kDa 
ITPR2                 0.004   inositol 1,4,5-triphosphate receptor, type 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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