Guide to the Human Genome
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Name: DNAJB11 Sequence: fasta or formatted (358aa) NCBI GI: 7706495
Description:

DnaJ (Hsp40) homolog, subfamily B, member 11 precursor

Referenced in:

Heat-Shock Proteins and Chaperonins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.9         14           2
 C cysteine            1.4          5           1
 D aspartate           7.3         26           2
 E glutamate           8.1         29           2
 F phenylalanine       5.0         18           2
 G glycine             9.5         34           2
 H histidine           2.5          9           1
 I isoleucine          5.9         21           2
 K lysine              7.0         25           2
 L leucine             8.4         30           4
 M methionine          1.7          6           1
 N asparagine          3.9         14           3
 P proline             5.3         19           1
 Q glutamine           5.3         19           2
 R arginine            6.4         23           2
 S serine              3.9         14           2
 T threonine           3.9         14           2
 V valine              7.3         26           2
 W tryptophan          0.3          1           1
 Y tyrosine            3.1         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DnaJ (Hsp40) homolog, subfamily B, member 11 precurso... 
DNAJA2                0.260   DnaJ subfamily A member 2 
DNAJA1                0.229   DnaJ (Hsp40) homolog, subfamily A, member 1 
DNAJA4                0.218   DnaJ (Hsp40) homolog, subfamily A, member 4 isoform...
DNAJA4                0.218   DnaJ (Hsp40) homolog, subfamily A, member 4 isoform...
DNAJB4                0.198   DnaJ (Hsp40) homolog, subfamily B, member 4 
DNAJB1                0.187   DnaJ (Hsp40) homolog, subfamily B, member 1 
DNAJB5                0.184   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform...
DNAJB5                0.184   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform...
DNAJB5                0.182   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform ...
DNAJA4                0.153   DnaJ (Hsp40) homolog, subfamily A, member 4 isoform...
DNAJB13               0.141   testis spermatogenesis apoptosis-related protein 6 [...
DNAJA3                0.133   DnaJ (Hsp40) homolog, subfamily A, member 3 isoform...
DNAJA3                0.133   DnaJ (Hsp40) homolog, subfamily A, member 3 isoform...
DNAJC10               0.109   DnaJ (Hsp40) homolog, subfamily C, member 10 
DNAJB9                0.103   DnaJ (Hsp40) homolog, subfamily B, member 9 
DNAJB6                0.103   DnaJ (Hsp40) homolog, subfamily B, member 6 isoform ...
DNAJB6                0.103   DnaJ (Hsp40) homolog, subfamily B, member 6 isoform b...
DNAJC16               0.098   DnaJ (Hsp40) homolog, subfamily C, member 16 
DNAJB12               0.095   DnaJ (Hsp40) homolog, subfamily B, member 12 
DNAJB12               0.095   DnaJ (Hsp40) homolog, subfamily B, member 12 
DNAJB2                0.095   DnaJ (Hsp40) homolog, subfamily B, member 2 isoform ...
DNAJB2                0.095   DnaJ (Hsp40) homolog, subfamily B, member 2 isoform ...
DNAJB3                0.093   DnaJ (Hsp40) homolog, subfamily B, member 3 
DNAJB8                0.091   DnaJ homolog, subfamily B, member 8 
DNAJB7                0.089   DnaJ (Hsp40) homolog, subfamily B, member 7 
DNAJC5                0.089   DnaJ (Hsp40) homolog, subfamily C, member 5 
DNAJC5B               0.088   DnaJ (Hsp40) homolog, subfamily C, member 5 beta [Ho...
DNAJB14               0.079   DnaJ (Hsp40) homolog, subfamily B, member 14 isoform...
DNAJC1                0.074   DnaJ (Hsp40) homolog, subfamily C, member 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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