Guide to the Human Genome
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Name: DNAJB1 Sequence: fasta or formatted (340aa) NCBI GI: 5453690
Description:

DnaJ (Hsp40) homolog, subfamily B, member 1

Referenced in:

Heat-Shock Proteins and Chaperonins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.4         15           1
 C cysteine            0.9          3           1
 D aspartate           6.8         23           2
 E glutamate           7.9         27           2
 F phenylalanine       5.9         20           2
 G glycine            10.9         37           3
 H histidine           1.8          6           1
 I isoleucine          6.5         22           2
 K lysine              8.2         28           2
 L leucine             5.3         18           1
 M methionine          2.1          7           1
 N asparagine          3.5         12           2
 P proline             7.6         26           2
 Q glutamine           2.4          8           1
 R arginine            7.6         26           2
 S serine              5.3         18           1
 T threonine           5.0         17           1
 V valine              5.0         17           2
 W tryptophan          0.3          1           1
 Y tyrosine            2.6          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DnaJ (Hsp40) homolog, subfamily B, member 1 
DNAJB4                0.658   DnaJ (Hsp40) homolog, subfamily B, member 4 
DNAJB5                0.621   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform...
DNAJB5                0.621   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform...
DNAJB5                0.621   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform ...
DNAJB13               0.425   testis spermatogenesis apoptosis-related protein 6 [...
DNAJA2                0.259   DnaJ subfamily A member 2 
DNAJA4                0.243   DnaJ (Hsp40) homolog, subfamily A, member 4 isoform...
DNAJA4                0.243   DnaJ (Hsp40) homolog, subfamily A, member 4 isoform...
DNAJA1                0.234   DnaJ (Hsp40) homolog, subfamily A, member 1 
DNAJB11               0.195   DnaJ (Hsp40) homolog, subfamily B, member 11 precurso...
DNAJA4                0.178   DnaJ (Hsp40) homolog, subfamily A, member 4 isoform...
DNAJB6                0.161   DnaJ (Hsp40) homolog, subfamily B, member 6 isoform ...
DNAJB6                0.161   DnaJ (Hsp40) homolog, subfamily B, member 6 isoform b...
DNAJB2                0.136   DnaJ (Hsp40) homolog, subfamily B, member 2 isoform ...
DNAJB2                0.136   DnaJ (Hsp40) homolog, subfamily B, member 2 isoform ...
DNAJB3                0.129   DnaJ (Hsp40) homolog, subfamily B, member 3 
DNAJB7                0.121   DnaJ (Hsp40) homolog, subfamily B, member 7 
DNAJB12               0.117   DnaJ (Hsp40) homolog, subfamily B, member 12 
DNAJB12               0.117   DnaJ (Hsp40) homolog, subfamily B, member 12 
DNAJA3                0.117   DnaJ (Hsp40) homolog, subfamily A, member 3 isoform...
DNAJA3                0.117   DnaJ (Hsp40) homolog, subfamily A, member 3 isoform...
DNAJB8                0.114   DnaJ homolog, subfamily B, member 8 
DNAJC18               0.102   DnaJ (Hsp40) homolog, subfamily C, member 18 
DNAJB9                0.101   DnaJ (Hsp40) homolog, subfamily B, member 9 
DNAJB14               0.099   DnaJ (Hsp40) homolog, subfamily B, member 14 isoform...
DNAJC5B               0.086   DnaJ (Hsp40) homolog, subfamily C, member 5 beta [Ho...
DNAJC16               0.086   DnaJ (Hsp40) homolog, subfamily C, member 16 
DNAJC21               0.081   DnaJ homology subfamily A member 5 isoform 1 
DNAJC21               0.081   DnaJ homology subfamily A member 5 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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