Guide to the Human Genome
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Name: DNAJA4 Sequence: fasta or formatted (397aa) NCBI GI: 194328760
Description:

DnaJ (Hsp40) homolog, subfamily A, member 4 isoform 2

Referenced in:

Heat-Shock Proteins and Chaperonins

Other entries for this name:
alt prot [426aa] DnaJ (Hsp40) homolog, subfamily A, member 4 isoform 1
alt prot [370aa] DnaJ (Hsp40) homolog, subfamily A, member 4 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.8         15           1
 C cysteine            3.0         12           1
 D aspartate           6.0         24           2
 E glutamate           9.3         37           2
 F phenylalanine       2.8         11           2
 G glycine             9.3         37           4
 H histidine           2.5         10           1
 I isoleucine          7.6         30           2
 K lysine             10.8         43           2
 L leucine             7.6         30           2
 M methionine          2.8         11           1
 N asparagine          2.0          8           1
 P proline             5.0         20           2
 Q glutamine           6.8         27           2
 R arginine            4.8         19           2
 S serine              4.3         17           2
 T threonine           2.3          9           1
 V valine              6.5         26           2
 W tryptophan          0.5          2           1
 Y tyrosine            2.3          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DnaJ (Hsp40) homolog, subfamily A, member 4 isoform... 
DNAJA4                1.000   DnaJ (Hsp40) homolog, subfamily A, member 4 isoform...
DNAJA4                0.887   DnaJ (Hsp40) homolog, subfamily A, member 4 isoform...
DNAJA1                0.742   DnaJ (Hsp40) homolog, subfamily A, member 1 
DNAJA2                0.504   DnaJ subfamily A member 2 
DNAJB1                0.209   DnaJ (Hsp40) homolog, subfamily B, member 1 
DNAJB5                0.197   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform...
DNAJB5                0.197   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform...
DNAJB5                0.197   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform ...
DNAJB11               0.196   DnaJ (Hsp40) homolog, subfamily B, member 11 precurso...
DNAJB4                0.190   DnaJ (Hsp40) homolog, subfamily B, member 4 
DNAJA3                0.123   DnaJ (Hsp40) homolog, subfamily A, member 3 isoform...
DNAJA3                0.123   DnaJ (Hsp40) homolog, subfamily A, member 3 isoform...
DNAJB6                0.111   DnaJ (Hsp40) homolog, subfamily B, member 6 isoform ...
DNAJB6                0.111   DnaJ (Hsp40) homolog, subfamily B, member 6 isoform b...
DNAJB8                0.109   DnaJ homolog, subfamily B, member 8 
DNAJB13               0.106   testis spermatogenesis apoptosis-related protein 6 [...
DNAJB3                0.101   DnaJ (Hsp40) homolog, subfamily B, member 3 
DNAJB2                0.092   DnaJ (Hsp40) homolog, subfamily B, member 2 isoform ...
DNAJB2                0.092   DnaJ (Hsp40) homolog, subfamily B, member 2 isoform ...
DNAJB12               0.090   DnaJ (Hsp40) homolog, subfamily B, member 12 
DNAJB12               0.090   DnaJ (Hsp40) homolog, subfamily B, member 12 
DNAJB7                0.089   DnaJ (Hsp40) homolog, subfamily B, member 7 
DNAJB14               0.084   DnaJ (Hsp40) homolog, subfamily B, member 14 isoform...
DNAJC7                0.078   DnaJ (Hsp40) homolog, subfamily C, member 7 isoform...
DNAJC7                0.078   DnaJ (Hsp40) homolog, subfamily C, member 7 isoform...
DNAJC18               0.075   DnaJ (Hsp40) homolog, subfamily C, member 18 
DNAJB9                0.075   DnaJ (Hsp40) homolog, subfamily B, member 9 
DNAJC21               0.074   DnaJ homology subfamily A member 5 isoform 1 
DNAJC21               0.074   DnaJ homology subfamily A member 5 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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