Guide to the Human Genome
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Name: DNAJB13 Sequence: fasta or formatted (316aa) NCBI GI: 39204547
Description:

testis spermatogenesis apoptosis-related protein 6

Referenced in:

Heat-Shock Proteins and Chaperonins
Testes and Sperm

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.2         10           1
 C cysteine            0.9          3           2
 D aspartate           7.0         22           2
 E glutamate           7.0         22           2
 F phenylalanine       7.3         23           2
 G glycine             8.5         27           2
 H histidine           1.9          6           2
 I isoleucine          7.6         24           2
 K lysine              8.5         27           2
 L leucine             8.9         28           2
 M methionine          1.3          4           1
 N asparagine          3.8         12           2
 P proline             7.0         22           1
 Q glutamine           4.4         14           1
 R arginine            5.7         18           2
 S serine              4.1         13           2
 T threonine           5.1         16           2
 V valine              4.4         14           1
 W tryptophan          0.6          2           1
 Y tyrosine            2.8          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   testis spermatogenesis apoptosis-related protein 6 [... 
DNAJB1                0.458   DnaJ (Hsp40) homolog, subfamily B, member 1 
DNAJB5                0.444   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform...
DNAJB5                0.444   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform...
DNAJB5                0.444   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform ...
DNAJB4                0.441   DnaJ (Hsp40) homolog, subfamily B, member 4 
DNAJA1                0.190   DnaJ (Hsp40) homolog, subfamily A, member 1 
DNAJA2                0.181   DnaJ subfamily A member 2 
DNAJB11               0.160   DnaJ (Hsp40) homolog, subfamily B, member 11 precurso...
DNAJB6                0.134   DnaJ (Hsp40) homolog, subfamily B, member 6 isoform ...
DNAJB6                0.134   DnaJ (Hsp40) homolog, subfamily B, member 6 isoform b...
DNAJA4                0.133   DnaJ (Hsp40) homolog, subfamily A, member 4 isoform...
DNAJA4                0.133   DnaJ (Hsp40) homolog, subfamily A, member 4 isoform...
DNAJA4                0.123   DnaJ (Hsp40) homolog, subfamily A, member 4 isoform...
DNAJB3                0.121   DnaJ (Hsp40) homolog, subfamily B, member 3 
DNAJB2                0.118   DnaJ (Hsp40) homolog, subfamily B, member 2 isoform ...
DNAJB2                0.118   DnaJ (Hsp40) homolog, subfamily B, member 2 isoform ...
DNAJB8                0.112   DnaJ homolog, subfamily B, member 8 
DNAJB7                0.110   DnaJ (Hsp40) homolog, subfamily B, member 7 
DNAJB12               0.102   DnaJ (Hsp40) homolog, subfamily B, member 12 
DNAJB12               0.102   DnaJ (Hsp40) homolog, subfamily B, member 12 
DNAJA3                0.089   DnaJ (Hsp40) homolog, subfamily A, member 3 isoform...
DNAJA3                0.089   DnaJ (Hsp40) homolog, subfamily A, member 3 isoform...
DNAJC18               0.088   DnaJ (Hsp40) homolog, subfamily C, member 18 
DNAJB14               0.085   DnaJ (Hsp40) homolog, subfamily B, member 14 isoform...
DNAJC21               0.077   DnaJ homology subfamily A member 5 isoform 1 
DNAJC21               0.077   DnaJ homology subfamily A member 5 isoform 2 
DNAJC7                0.073   DnaJ (Hsp40) homolog, subfamily C, member 7 isoform...
DNAJC7                0.073   DnaJ (Hsp40) homolog, subfamily C, member 7 isoform...
DNAJC5B               0.073   DnaJ (Hsp40) homolog, subfamily C, member 5 beta [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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